| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4999 |
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| Symbol | |
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| ID | 6412691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5381734 |
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| End bp | 5383509 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714882 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_001993963 |
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| Protein GI | 192293358 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.694875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCGG TCGCGCGCGC GAAGCGGAAG TTTATCTTGT TGCTGATCAA ACCGTCACAT
TACGACGATG ACGGCTACGT CCTGCGCTGG TGGCGCGGGA TCATCCCCTC GAACTCACTC
GCCACGCTTT ACGGCATCGC CGCCGACGTC GCCGCGCGCC AGGTGCTCGG CGCCGACGTC
GAGTTCGAGA TCGAGGCGAT GGACGAGTTC AATACCCGGA TCGATATTCC GGCGCTGCTC
GACCGCTTCG CCCGCAACGG CAATTTCGGC TTGGTGGGGC TGGTCGGGGT GCAGTCCAAC
CAATATCCGC GCGCGCTCGA TATCGCCCGG CCGTTCCGCG CCAGCGGTGT GCCGGTGGTG
ATGGGCGGGT TTCACGTCTC TGGTTGTCTG GCGATGCTCG ATGGCAAGGC GATCGGGCTC
GACGACTGCC GCGACATGGG CGTGGCGATG TTCGCCGGCG AGGCCGAGGG CGGCCGGTTC
GATGGCGTGC TGCAGGACGC GGCGGCCGGG CAGCTGCAGC CGGTCTACAA CTTCCTCAAC
GACCTGCCCG GGATCGAGGG CGTGCCGGCG CCATATCTGC CGCTCGCGAC CGTGAAGCGG
ACGCTTGGGC TGTCGACCAG CGTCGATGCC GGGCGAGGCT GTCCGTATCA GTGCTCGTTC
TGCACCATCA TCAACGTGCA GGGCCGCAAG TCGCGCTACC GCACGCCCGA TGATATCGAG
GCGATGGTGC GCCGAAACTG GGCGCAGGGC ATCAGCAAGT ACTTCATCAC CGACGACAAC
TTCGCCCGCA ATAAGGATTG GGAGGCGATC CTCGATCGGC TGATCCAGAT CCGCGAGACC
GAAGACATCC CGCTCGGCTT CATGATCCAG GTCGACACGC TGTGTCACAA GATCCCGCGC
TTCATCGAGA AGGCCAAGCG CGCCGGGGTG ACGCGGGTGT TCATCGGGCT GGAGAACATC
AATCCGGCCA ATCTGCTCAC CGCCAACAAG CGGCAGAACA AGATCACCGA ATATCGCGCG
ATGCTGCTGG CCTGGAAGGA CCACGGCATC ATCACGCTGG CCGGCTACAT CCTGGGCTTC
CCGGCCGACA CGCCGGCCTC GATCCGCGCC GATATCGACA TCATCAAGCG CGAACTGCCG
ATCGACGTCA TGGAGTTCTT CTGCCTGACG CCGCTGCCCG GCTCTGAGGA TCACCAGACG
CTGTGGCGCG CCGGCGTCGC GATGGATCCC GATCTCAACA ACTACGACGT CGAACACGTC
TGCACCGCGC ATCCGTTGAT GTCGCGGCCC GAATGGGAAG CGATCTATCG CGAGGCGTGG
AGCCGCTACT ACACGCCCGA CCATATCGAG ACGCTGCTGC GGCGCGCCGC GGCGACCGGG
ATCAAGATCA GCAGCCTGGT CAAGCTGCTG GCGATCTTCT CCACCGCGAT CCGGGTCGAG
AATGTGCACC CGCTGCAATG CGGCCTGTTC CGGCAGCGGC ACCCGTCCGA GCGGCGGCCC
GGCCTCGCCG CGCCGAACGC GCTCCTGTTC TGGCCGCGTT TTGCGCTCGA CAGCGTACGC
AAGACCGGCG TCATTCTGGC GGCGTTCGCC AAAGTCGCGG CGATTGGCGT CCGGGTCGCC
CGCGATCCGC AGCGGCTGGC CTACACCGAT CAGGCGCTGA CGCCGGTGTC GGACGACGAT
GCGGATTCGC TGGACCTCTT CACCCAGAGC GCCAGCGCCA AGCAGGCCGT TGCCCACCAG
AAGAAGGTGT TTGATCTCAC GCACGGGACG CCGTAA
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| Protein sequence | MAPVARAKRK FILLLIKPSH YDDDGYVLRW WRGIIPSNSL ATLYGIAADV AARQVLGADV
EFEIEAMDEF NTRIDIPALL DRFARNGNFG LVGLVGVQSN QYPRALDIAR PFRASGVPVV
MGGFHVSGCL AMLDGKAIGL DDCRDMGVAM FAGEAEGGRF DGVLQDAAAG QLQPVYNFLN
DLPGIEGVPA PYLPLATVKR TLGLSTSVDA GRGCPYQCSF CTIINVQGRK SRYRTPDDIE
AMVRRNWAQG ISKYFITDDN FARNKDWEAI LDRLIQIRET EDIPLGFMIQ VDTLCHKIPR
FIEKAKRAGV TRVFIGLENI NPANLLTANK RQNKITEYRA MLLAWKDHGI ITLAGYILGF
PADTPASIRA DIDIIKRELP IDVMEFFCLT PLPGSEDHQT LWRAGVAMDP DLNNYDVEHV
CTAHPLMSRP EWEAIYREAW SRYYTPDHIE TLLRRAAATG IKISSLVKLL AIFSTAIRVE
NVHPLQCGLF RQRHPSERRP GLAAPNALLF WPRFALDSVR KTGVILAAFA KVAAIGVRVA
RDPQRLAYTD QALTPVSDDD ADSLDLFTQS ASAKQAVAHQ KKVFDLTHGT P
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