| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4956 |
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| Symbol | |
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| ID | 6412648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5336285 |
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| End bp | 5337040 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714839 |
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| Product | putative sulfite oxidase cytochrome subunit (SoxD) |
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| Protein accession | YP_001993920 |
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| Protein GI | 192293315 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAT CGCTTAAGGC TCTCGCTGGG TTCGCCGTCG TTGCCGCGAT GGTGCTGCCG
CTGGCGCAGG CCGGCGCCGA ACACAAGCCA AGTCACAAGG CGAAAGACGC GGTGAAGGAA
GCCAAAGCAC CGGCGCAGCC TGCCGTGCCG GCTGCGCCGC CCGCGCCGGT GAAGCTCGGT
CTGGGCCGTC CGGCGCTGCC GGAAGAGATC GCGGCCTGGG ACATCGATGT CCGTCCTGAC
GGGCAAGGGC TGCCGCCGGG TCGCGGCACT GCCAAGGAAG GCGATGCGCT GTTTCAGGAG
AAGTGTTCGA CCTGCCACGG CGAATTCGGC GAAGGCGTCG GCCGCTATCC GGTGCTGTCC
GGTGGCCACG GCACGCTGAA GGCGGATCGT CCCGACAAGA CGATCGGCTC GTATTGGCCG
GACGCCACCA CGGTGTACGA CTACGTCCGC CACGCGATGC CGTTCGGCAA CGCCCGCTCG
CTCAGCAATG ACGAGATCTA TGCGCTGACG GCGTACATCC TCAACATGAA CGACGTCATC
AAGGATCAGG ACTTCGAGCT GAACCAGAAC AATCTCGCCA AGGTGAAGAT GCCGAACGCC
GACGGCTTCT ATGAAGACGA TCGCGATACG GCCGAGAAGG CGTTCTGGAA CAAGAATCCG
TGCATGAAGG ACTGCGGGCC TGCCCCGAAG GTGATCGGCC GCGCGATCGC GGTCGACGTC
ACGCCCGACG AAAAGGCCGG GCCGAAAGTG GATTGA
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| Protein sequence | MSKSLKALAG FAVVAAMVLP LAQAGAEHKP SHKAKDAVKE AKAPAQPAVP AAPPAPVKLG
LGRPALPEEI AAWDIDVRPD GQGLPPGRGT AKEGDALFQE KCSTCHGEFG EGVGRYPVLS
GGHGTLKADR PDKTIGSYWP DATTVYDYVR HAMPFGNARS LSNDEIYALT AYILNMNDVI
KDQDFELNQN NLAKVKMPNA DGFYEDDRDT AEKAFWNKNP CMKDCGPAPK VIGRAIAVDV
TPDEKAGPKV D
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