Gene Rpal_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4900 
Symbol 
ID6412586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5267309 
End bp5267923 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID642714777 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001993864 
Protein GI192293259 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.909356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGC TTTCCGAGAA TACCGAAGCC GACATGCGGC ACCGCATCCT GGTGGTGGCC 
GAACGGCTGT TTCGTGAGAT CGGCTACCAG AAGACCACGG TGGCCGACAT CGCCAAGTTG 
CTGCAGATGA GCCCGGCCAA CGTCTATCGC TTCTTCGATT CGAAGAAGGC GATCCACAAG 
GGCGTGGCGC GGCATCTGAT GGCGGAGGTC GAGCAGGCGG CGATCGCGAT CGTCCACGCC 
CCCGGTCCCG CCGTGCAGCG GCTGCGCGAT CTGCTCACCA CCGTGCACCG GATGAATTGC 
GAACGCTACA TCGGCGACGC CAAGCTGCAC GAGATGGTGG CGATCGCGAT GGAGGAGAAC 
TGGGACGTCT GCATCGCCCA TATGGAGTTC ATCACCGGCA CGATCGGCGA GGTGATCGTC 
CAGGGCGTGG CGAGCGGCGA GTTCAAGGTC GCCGATGTGC CACAGGCGGC GAGCTGCACC 
TGCGCCGCGA TGATCCGGTT CTTCCACCCG CAGATGATCG CGCAGAGCTT CACCAAGGAG 
CGGCCGACCC TCGAGGACAT GATCGATTTC GTGCTGGCGG CGCTCGGCGC CGGCCGGCGC 
GCCGACGCGC AATAA
 
Protein sequence
MTLLSENTEA DMRHRILVVA ERLFREIGYQ KTTVADIAKL LQMSPANVYR FFDSKKAIHK 
GVARHLMAEV EQAAIAIVHA PGPAVQRLRD LLTTVHRMNC ERYIGDAKLH EMVAIAMEEN 
WDVCIAHMEF ITGTIGEVIV QGVASGEFKV ADVPQAASCT CAAMIRFFHP QMIAQSFTKE 
RPTLEDMIDF VLAALGAGRR ADAQ