| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4732 |
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| Symbol | |
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| ID | 6412418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5094237 |
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| End bp | 5095679 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714611 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001993698 |
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| Protein GI | 192293093 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.708423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTGA TTGCGCTCAT CCTGCTGCCA GCTTTCGGCG GCTTCGTCGC ATTCTTCGTC
GCCGGCAAGG GCGAACGTGA GCGCTGGGTG ACGATCGCGA CCTTCGCGCT GATGCTGGTG
CTGCTGGTCG CGGTCGTCGC GACCGGGGCC GAGGGGCGCT GGTACGACAA GGTGTCGTAT
CCGTGGGTGC CGTCGTTCGG CATCTCGCTG GATTTCGCCA TCGACGGCCT GTCGGCCACC
ATGATCGCGC TTGCCGCCGG TCTCGGCATC ATCTCGGTGA TGGCGTCGTG GTCGGAGATT
CGCACCCAGT CCGGGCTGTT TCACGCCAGC CTGTGCTGGA CCGTGGCGGC GACCGTCGGC
GTGTTCCTGT CGTTCGACCT TCTCATCTTT GCATTCTTCT GGGAAGCGAT GCTGGTGCCA
GCGTTCACGC TGATCGCGGT GTGGGGCCAT GGCGACAAAG AAGGCGCCGC GCTGAAATTC
CTGATCTTCA ACGCGGTCGC CGGCTTCGGC TTGTTGGCGG CGTCGTTCGC GCTGGCGGCG
ATGGCCGACC ACATGACGTT CAGCGCCTTC GAACTCGCCG AGATGAAGCT GTCGACGCCG
GTCCAGGTCT GGATGCTGCT CGGCTTCTCG CTGGCCTTCA TGGTCAAGCT GTCGGTGCCG
CCGTTCCACG CCTGGTTGCC GGAAGCGCAT ACGCTGGCGC CGACCGCGGG CTCGATCCTG
CTCGCCGGCC TGCTCTTGAA GACCGGTGCC TACGGCCTGT TCCGGTTTGC GCCTATGCTG
TTTCCGGACG GCCTCGCCGC GGTGGCGCCC TATGGCATCG CGCTTGGCGC CGCCGGCGCG
CTGTACGGCG GCCTCGTCGC CTGCGGCCAG AACGACGCCA AGCGGCTGGT CGCCTATACG
TCGATCGCTC ACATGTCGAT CGTGCTGATG GGCATCTCCG CCGGTGTGCA CTACGCGCTT
GCCGGTGCCG CGGTCGAGAT GATCGCGCAC TCGTTCTCGG CTTCGGCGCT GTTCCTGCTG
ATCGGCGCGC TGTACGAGCG CACCCACACC CGCGACCTGC GCCAGCTCGG CGGCTTGCAG
CAGACCGCGC CGAAATTCGC CGCAGCGTTC GCGTTGTTCT GTTCGGCGCT GCTGGCGCTG
CCCGGCACCG CCAATTTCGT CGGCGAAGCG CTGGTGGTGG TTGGCATCTT CCAGGTCAAT
TGGGTGTTCG CGCTCTTGGC GCTGTCGACC CTGGTCGTCT CGGTGATCTA CGCCACGCGG
CTGCTCAAGG GCCTGGTGTT CGGCCTGCCG CAGCCCAAGC CGCCGCTCGC CGACATGACC
TGGCGCGAGT ATTGGCCGAT CCTGGTGATG GGCATCGGCA CGCTGATCAT CGGCCTCTAT
CCGCAGAGCC TGTTGGCGCT GCTTGAGCCG GCGATCAAGG CCGCGCTCAC TCAGACGCCG
TGA
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| Protein sequence | MALIALILLP AFGGFVAFFV AGKGERERWV TIATFALMLV LLVAVVATGA EGRWYDKVSY
PWVPSFGISL DFAIDGLSAT MIALAAGLGI ISVMASWSEI RTQSGLFHAS LCWTVAATVG
VFLSFDLLIF AFFWEAMLVP AFTLIAVWGH GDKEGAALKF LIFNAVAGFG LLAASFALAA
MADHMTFSAF ELAEMKLSTP VQVWMLLGFS LAFMVKLSVP PFHAWLPEAH TLAPTAGSIL
LAGLLLKTGA YGLFRFAPML FPDGLAAVAP YGIALGAAGA LYGGLVACGQ NDAKRLVAYT
SIAHMSIVLM GISAGVHYAL AGAAVEMIAH SFSASALFLL IGALYERTHT RDLRQLGGLQ
QTAPKFAAAF ALFCSALLAL PGTANFVGEA LVVVGIFQVN WVFALLALST LVVSVIYATR
LLKGLVFGLP QPKPPLADMT WREYWPILVM GIGTLIIGLY PQSLLALLEP AIKAALTQTP
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