Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4725 |
Symbol | |
ID | 6412411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5086696 |
End bp | 5087427 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714604 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_001993691 |
Protein GI | 192293086 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCTC ACCAAATCAT GACCCGGCAG CTCGTCACGA TCGGACCCGA GGCGTCGATC GTCGACGCCG CCAACGCGAT GATCGACAAT CACGTCAGCG GACTGCCGGT TGTCGACGAC GACGGCAAGC TGATCGGCAT CATTTCCGAG GGCGATTTCA TTCGCCGCGC CGAGATCGGT ACGCAGCGCA AACGCGGCCG CTGGCTGCGG ATGCTGCTCG GCCCCGGCAC CTGCGCCGGC GACTTCGTCC ATGAGCACGG CCGCAAGGTC GGCGAGGTGA TGACGCAGCA TCCCTACACG ATCAGCGAGG ACACCTCGAT CGAGACGATC GTCAAGCTGA TGGAGAAGCA TCACGTCAAA CGCTTCCCGG TGATGCGCGG CGATCTCCTG GTCGGCATCG TCACCCGCAA AAACCTGCTG CGCGCCGTCG CCGATCTGGC GCGCCAGGCG CCCGAACCGA ATGCCGCCGA CGACAAGATC CGCGACAAGA TCATCTCCGA AATCGAACGC AACGACTGGC GCCCCTTCGG ACTCAGCGTG CTGGTACGGG ACGGCGTGGT GCACATCAAC GGCGTGATCA CCGAGGAGCG CTCGCGGCAG GCCGCCGTGG TGGTCGCAGA GAACGTCTGC GGGGTGCGCG AAGTGCATGA TCATCTGTGC TGGGTCGACA CCATGTCCGG GTTCTACCTG AACTCGCCGG AAGACGATCG GGCAGCTAAA AAAGCAAGTT GA
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Protein sequence | MRAHQIMTRQ LVTIGPEASI VDAANAMIDN HVSGLPVVDD DGKLIGIISE GDFIRRAEIG TQRKRGRWLR MLLGPGTCAG DFVHEHGRKV GEVMTQHPYT ISEDTSIETI VKLMEKHHVK RFPVMRGDLL VGIVTRKNLL RAVADLARQA PEPNAADDKI RDKIISEIER NDWRPFGLSV LVRDGVVHIN GVITEERSRQ AAVVVAENVC GVREVHDHLC WVDTMSGFYL NSPEDDRAAK KAS
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