| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4565 |
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| Symbol | |
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| ID | 6412249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4916904 |
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| End bp | 4917851 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714445 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001993534 |
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| Protein GI | 192292929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0477928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAGC TGATCGTCAT TTCCACCCTC AATGGCGTTC TGTACGGAAT GCTGCTGTTC
TTGATGGCGA GCGGGCTCAC CGTCATCTTC AGCATGCTCG GCGTGCTGAA CTTCGCTCAT
GCCAGCTTCT ATATGCTCGG CGCCTTCTTC GGCTATCAGA TCAGCCGCTG GACAGGGTTC
TGGCCGGCGC TGCTGATCGC GCCGCTGCTC GCCGGCGCGA TCGGAGCCGC GGTCGAACGG
TTCGGCCTGC GCCGCGTCCA CCGCAACGGC CATGTCGCCG AACTGCTGTT CACCTTCGGG
CTCGCCTTCG CGATCGAAGA AGTGGTGTCT ATCATCTGGG GCAAGGTTCC GGTCGATTAC
CGCACCCCGG CTCTGCTCGA CTTCCCGGCA TTCACGATCT TCTCCACCAA CTACCCCGCC
TACAAGATGT TCATGCTGGC AGTGTCGGTG GTGATCTTCG TCGGCCTCCT GGTGGTGCTG
AAGAAGACCC GGATCGGCCT CATCGTTCAG GCGGCGCTGA CCCACCCACA CATGGTCGCG
CATCTCGGCC ATAACGTCGA ACGGATCTTC ATGCTGGTGT TCGGCGTCGG CACTGCGCTG
GCCGCCGTTG CCGGCGTGAT CGCGGGCCCG TCGCTGGTGA CGCAGTCCAA CATGGCTTCG
CTGCTCGGGC CGATCCTGTT CGTCGTCGTG GTGGTCGGCG GCCTCGGCTC GCTGCCCGGC
GCCTTCATCG CCTCGCTGCT GATCGGGCTG CTGCAGACCT TCGCGGTGTC GATCAACGCT
TCGCCCGCAA CGCTGTTCGG TCCGCTCGGT CCCGATCTCG CCGCCTCCTG GCTCAACGAC
ATCTGGAACG TGACCATCGC TCAGATCGCA CCGATCATGC CGTATCTGCT GCTCGTGCTT
ATCCTGATCT TCCGGCCGAT GGGGCTGTTG GGAACCCGCG AAACATGA
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| Protein sequence | MLELIVISTL NGVLYGMLLF LMASGLTVIF SMLGVLNFAH ASFYMLGAFF GYQISRWTGF
WPALLIAPLL AGAIGAAVER FGLRRVHRNG HVAELLFTFG LAFAIEEVVS IIWGKVPVDY
RTPALLDFPA FTIFSTNYPA YKMFMLAVSV VIFVGLLVVL KKTRIGLIVQ AALTHPHMVA
HLGHNVERIF MLVFGVGTAL AAVAGVIAGP SLVTQSNMAS LLGPILFVVV VVGGLGSLPG
AFIASLLIGL LQTFAVSINA SPATLFGPLG PDLAASWLND IWNVTIAQIA PIMPYLLLVL
ILIFRPMGLL GTRET
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