| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4546 |
|---|
| Symbol | |
|---|
| ID | 6412230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4897068 |
|---|
| End bp | 4898264 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642714426 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001993515 |
|---|
| Protein GI | 192292910 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGT CTTATATGTT CACGAGTGAG TCCGTGTCGG AAGGACATCC GGACAAGGTT
TGCGATCGGA TCTCCGACGA GATCGTCGAT CTGTTCTATC GCGAAGGGCC GAAGGCCGGC
ATCGATCCGT GGGCGATCCG TGCCGCCTGC GAAACGCTTG CGACCACCAA CAAGGTGGTG
ATCGCCGGTG AGACCCGCGG CCCGGCCTCG GTGACCAACG AGCAGATCGA GCAGGTGGTG
CGCGATGCCA TCAAGGACAT CGGCTACGAG CAGGAAGGCT TCCACTGGAA GACCGCCGAC
ATCGAGATCC TGCTGCATCC GCAGTCGGCC GACATCGCGC AGGGCGTCGA CGCGCTGCAG
CCCGGCACCA ACAAGGAAGA GGGCGCCGGC GACCAGGGCA TCATGTTCGG CTACGCCACT
AATGAGACGC CCGACCTGAT GCCGGCGCCG ATCTTCTACG CCCACAAGAT CCTGCGGCTG
ATCTCCGAAG CCCGCCACTC CGGCAAGGAG AAGGTGCTCG GCCCGGACTC CAAGAGCCAG
GTGACGATCC AGTACGAGAA CGGCAAGCCG CAATACGTCC GCGAGATCGT GGTGTCGCAT
CAGCACCTGA TCGAGGACCT GAGCTCGAAC CAGATCCGCG ACTGCGTCGA ACCCTATGTG
CGCCAGGCGC TGCCCGACGG CTGGATCACC GACAACACGA TCTGGCACAT CAACCCGACC
GGCAAGTTCT ACATCGGCGG TCCGGACGGC GACACCGGCC TCACCGGTCG CAAGATCATC
GTCGACACCT ACGGCGGTGC TGCGCCGCAC GGCGGCGGCG CGTTCTCCGG CAAGGACCCG
ACCAAGGTCG ACCGCTCGGC GGCTTACGCG GCGCGCTACC TCGCCAAGAA CGTGGTCGCC
TCCGGCCTCG CCGACAAGTG CACCCTGCAG CTCGCCTACG CGATCGGCGT GGCGCGGCCG
CTGTCGATCT ATATCGACAC CCACGGCACC GGGAAGGTGT CCGAGGACAA GCTCGAGACC
ATCGTGGCCG AGGTGATGGA CCTGACCCCG CGCGGCATCC GCACCCATCT CGACCTCAAC
AAGCCGATCT ACGCCCGGAC CTCGTCCTAC GGCCATTTCG GCCGCACCCC GGACGCCGAC
GGCGGCTTCT CCTGGGAGAA GACCGATCTT GCCGACGCCA TGAAGCGTGC GGTGTAA
|
|---|
| Protein sequence | MRASYMFTSE SVSEGHPDKV CDRISDEIVD LFYREGPKAG IDPWAIRAAC ETLATTNKVV
IAGETRGPAS VTNEQIEQVV RDAIKDIGYE QEGFHWKTAD IEILLHPQSA DIAQGVDALQ
PGTNKEEGAG DQGIMFGYAT NETPDLMPAP IFYAHKILRL ISEARHSGKE KVLGPDSKSQ
VTIQYENGKP QYVREIVVSH QHLIEDLSSN QIRDCVEPYV RQALPDGWIT DNTIWHINPT
GKFYIGGPDG DTGLTGRKII VDTYGGAAPH GGGAFSGKDP TKVDRSAAYA ARYLAKNVVA
SGLADKCTLQ LAYAIGVARP LSIYIDTHGT GKVSEDKLET IVAEVMDLTP RGIRTHLDLN
KPIYARTSSY GHFGRTPDAD GGFSWEKTDL ADAMKRAV
|
|---|
| |