Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4485 |
Symbol | |
ID | 6412169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4827127 |
End bp | 4828278 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714367 |
Product | protein of unknown function DUF140 |
Protein accession | YP_001993456 |
Protein GI | 192292851 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGC AGATAGCGTT GGAGGGCGAT CCGTCGCTCG AACGGATCGC GCGTGGGGAA GGGCTTGCGC TGTGCGCGTC GGGATCGTGG ACGGCGCGGT TCGCGCCGGC GCTGGAGCGG CTGGTCACTG AAGCGGAACA GCTCGGAGGC AGCAAGCCGA ACGTCTCCAT CGACGTGTCC GGTATCGCGC GGCTCGACAC CTTCGGAGCC TGGCTGATCG AGCGGCTGCG GCGCAATCTC GGCCAGGACG GTACAGAGGC GCGGATCGCC GGGTTGTCGA CCAACTATGC CAGCCTGGTC GACGAAGTGC GGCAGGTCAG TGAAGCCGGG CCCGAGCCGC GGCGCGGCGG ATCGCTGCGC GCGCCGATCG AACGGCTCGG CCGCACCATC TACGCCTTTA TCGACGACAT CGTGGCGCTG ATCAGCATGA TGGGGGCGGT GCTGGCCGGC GTACTGCGGG TGGTGGTCCG GCCGACCTCG TTTCGGCTGA CTTCGACCGT GCACCACCTC GAGCAGGTAT GCTGGCGCGC GGTGCCGATC ATCGTGCTCA TCACCTTCCT GATCGGCTGC ATCATCGCCC AGCAGGGCAT TTTCCATTTC CGCAAGTTCG GAGCCGACGT GTTCGTGGTC GACATGCTCG GCGTGCTGGT GCTGCGCGAG ATCGGCGTGC TGCTGGTGTC GATCATGGTG GCGGGCCGCT CTGGCAGCGC CTACACGGCC GAGCTCGGCT CGATGAAGAT GCGCGAGGAG ATCGACGCCC TGCGCACCAT GGGGTTCGAT CCGATCGACG TGCTGATCGT GCCGCGGCTG ATCGCGCTGG TGCTGGCGGT GCCGATCCTC ACCTTCCTTG GCGCGATGTC GGCGCTGTAT GGCGGTGGTC TGGTCGCCTG GATGTATGGC GGCGTCGATC CCGAGGCGTT CCTGCTGCGT CTGCGCGACG CGATCTCGAT CGACCACTTC ACCGTCGGCA TGATCAAGGC GCCGGTGATG GCGGTGGTGA TCGGCATCGT TGCCTGCGTC GAGGGGCTGG CGGTGCAGGG CAGCGCTGAG TCGCTCGGCA GCCACACCAC CGCCTCGGTG GTGAAGAGCA TCTTTTTCGT GATCGTGATG GACGGCGTAT TCGCGATCTT CTTCGCTGGG ATCGGGATCT GA
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Protein sequence | MTQQIALEGD PSLERIARGE GLALCASGSW TARFAPALER LVTEAEQLGG SKPNVSIDVS GIARLDTFGA WLIERLRRNL GQDGTEARIA GLSTNYASLV DEVRQVSEAG PEPRRGGSLR APIERLGRTI YAFIDDIVAL ISMMGAVLAG VLRVVVRPTS FRLTSTVHHL EQVCWRAVPI IVLITFLIGC IIAQQGIFHF RKFGADVFVV DMLGVLVLRE IGVLLVSIMV AGRSGSAYTA ELGSMKMREE IDALRTMGFD PIDVLIVPRL IALVLAVPIL TFLGAMSALY GGGLVAWMYG GVDPEAFLLR LRDAISIDHF TVGMIKAPVM AVVIGIVACV EGLAVQGSAE SLGSHTTASV VKSIFFVIVM DGVFAIFFAG IGI
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