| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4296 |
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| Symbol | |
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| ID | 6411980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4622116 |
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| End bp | 4625220 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714178 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001993267 |
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| Protein GI | 192292662 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0155758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCTCA CAGACATCTT CATCAAGCGC CCGGTGCTGT CGCTTGTGGT CAGCATGCTG
ATCCTGCTGA TCGGCTTTCG CGCCGCGATG ACGCTGCCGA TCCGCCAGTA TCCGAAGCTG
TCCAATACCG TGGTCACCAT CACCACGGCG TATCCGGGCG CGTCGCCGGA TCTGATGCAG
GGCTTCATCA CCACGCCGCT GGAGCAGGCG GTCGCTTCGG CCGAAGGCGT CGACTACATC
ACCTCGTCGT CGACCCAAGG GCAGAGCCTG ATCACGGTTT ACGTCAAGCT CAACTTCGAT
CCCAACCAGG CGCTCACCGA AGTGCTGGCG AAGGTGAATT CGGTCAAATA CCTGATCCCG
AAGGAAGCCA ACGACCCGGT GATCGTCAAA TCCACCGGTC AGACTACGGC GGTGATGTAT
ATCGGCTTCG CCAGCAACGA GCTGTCGGGG TCGGCGATCT CAGACTATCT GACGCGCGTG
GTGCAGCCGG TGCTGTCGAC CGTCGACGGC GTCGCCTCCG CCGACATTCT CGGCGGCCAA
ACGTTCGCGA TGCGGATCTG GCTCGATCCG ATAAGGATGG CCGGTCGCGG CGTCTCGGCG
AACGACATCA CGGCGGCGAT CCAGGCCAAC AACTTCCAGG CGGCGGCCGG TCAGACCAAG
GGCTATCTGA CCGTCTCCAA CATCACCACC AACACCGACC TGCAGAACGT CGATCAGTTC
AAACGGATGA TCGTCAAGGC GCAGGGCGGC GGCTTCGTGA GGATGGAGGA CGTCGCCACC
GTCGAACTTG CGGCGCAGAG CACCGACAGC AGCGTGGCGT TCTCCGGCGA GCGCGCGATC
TTCATCGGCG TGCAGGCGAC CCCGCAGGGC AACCCGCTCA ACATCGTCAC CGGCGTGCGC
GCGCTGTTCC CCGAGATCGA ACGCAACCTG CCGCCGTCGA TGAGCATGAA GGTCGCCTAC
GACTCGACCA AGTTCATCCG CTCGTCGATC GACGAGGTGG AGAAGACGCT GATCGAAGCG
GTCGGCATCG TGATCGTGGT GATCTTCCTG TTCCTCGCCT CGTTCCGCTC GGTCATCATC
CCGGTGGTGA CGATTCCGTT GTCGCTGATC GGTGTCTGCA CCGCGATGCT GGCGATGGGC
TTTTCGATCA ACCTCCTGAC ACTGCTGGCG ATGGTGCTGG CGATCGGTCT GGTGGTCGAC
GACGCCATCG TGGTGGTGGA GAACATCCAC CGCCATCTGG AGGAGGGGAA AAGTCCGGTT
CAGGCCTCGC TGATCGGCGC CCGCGAGATC GTCGGGCCGG TGATCTCGAT GACCATCACG
CTGGCGGCGG TGTACGCGCC GATCGGCTTC CTCGGCGGTC TGACCGGTGC GCTGTTCCGC
GAATTCGCCT TCACGCTCGC CGGCTCGGTG ATCGTGTCCG GCATCATCGC GCTGACGCTG
TCGCCGATGA TGTGCTCGGT GCTGCTCAAG CACCAGGAGA GCCAGGGCTG GTTCGCCCGC
AAGGTCGACC ACGTGTTCAG CTCGATCACC CGCTGGTATG GCCGGCAGCT CGACCGCTCG
CTCGACTACC GTCCGATCAC CGGTCTGTTC GCCGTGGTGA TCCTCGGCCT CGTCGGCTTC
ATGTACACGC ACACCTCCAA GGAGCTGGCG CCGGAAGAAG ACCAGGGCAT CGTGTTCGCG
GTGACCAAGG CGCCGAAATA CGCCAACATC GACTACGCCA ACTATTACGG CGAGAAGCTC
GACAAGGCCT ATGCCAGCTT CCCCGAGACC GACCTGCGCT TCATCCTGAA CGGCACCTCG
GGCCCGAACA ACGGCATCGC GGGCATGCTG CTGAAGCCGT GGGACGAGCG CAAGCGGACC
GCGATGCAGC TGAAGCCGCT GGTGCAGAAG GAGCTGAGCA AGATCGAAGG CGTCAACGCC
TTCGCCTTCA ACCTGCCGCC GCTGCCCGGC GGTCCGGGCG GCCTGCCGAT CCAGATGGTG
ATCAACTCCA CGGCCGGCTT CCGCGCCGTG TACGAGGAGA TGGTCAAGCT GAAGGACGCG
GCGCGCAAGA GCGGCCTGTT CATCGTCGCC GACAGCGACC TCGACTTCAA CCAGCCGGTG
GTGCGGGTGA CGATCGACCG TACCAAGGCG AGCGACCTCG GCATCAACAT GCAGCGGCTC
GGCACCACGC TGGCGACGCT GCTGGGCGGC AACTACGTCA ACCGCTTCAA CCTCGAAGGC
CGGTCGTATC AGGTGATCCC GCAGGTGCCG CGCGCCGACC GTCTGACCCC GCAGTCGCTC
GACGGCTTCT ACGTGCCGAG CGCCAGCGGG CAGCAGGTGC CGCTGTCGAC GCTGGTGACG
ATCGAGACCG CCACCGATCC GAACGCACTG TCGCACTTCA ACCAGCTCAA CTCCGCCACC
TTCCAGGCGG TGCCGATGCC GGGCGTCACC GTCGGCCAAG CGGTCGACTT CCTCGAACAG
CAGGCCAAGA ACCTGCCGTC CGGCTTCAGC CACGACTACC TCGCCGACGC GCGGCAGTAC
GTGCAGGAAG GCAACCAGCT CGCCATCACC TTCGGCTTCG CGCTGATCAT CATCTTCCTG
GTGCTCGCCG CGCAGTTCGA AAGCTTGCGT GACCCGCTGG TGATCATGAT CTCGGTGCCG
ATGGCGATCT CGGGTGCGTT GATCCCGCTG TTCTTCGGCG TGGCGACGAT CAACATCTAT
ACCCAGGTCG GTCTGCTCAC CCTGGTCGGC CTGATCAGTA AGCACGGCAT CCTGATGGTC
GAGTTTGCGC GCGAGCTGCA GATCAAGGAG GCGCTCGACA AGCGCACTGC GATCGAACAG
TCGGCGCGGG TGCGGCTCCG GCCGATCCTG ATGACCACGG CCGCGATGGT GACCGGCCTG
CTGCCGCTGC TCACCGCTTC GGGCGCAGGC GCGGCAAGCC GGTTCTCGAT CGGTCTCGTC
GTGGTCTCGG GCATGATGAT CGGCACGCTG TTCACGCTGT TCGTGCTGCC GGCTGTGTAT
GTGGCGATCG GTACCGATCA CCGCGCCGCG CTGGAGTCCG ATCGCGCCAA GCAGATCGAG
GACTACGAGA TGGAGCACGG CTCGCCGGCA CTGAAGCCGA GCTGA
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| Protein sequence | MVLTDIFIKR PVLSLVVSML ILLIGFRAAM TLPIRQYPKL SNTVVTITTA YPGASPDLMQ
GFITTPLEQA VASAEGVDYI TSSSTQGQSL ITVYVKLNFD PNQALTEVLA KVNSVKYLIP
KEANDPVIVK STGQTTAVMY IGFASNELSG SAISDYLTRV VQPVLSTVDG VASADILGGQ
TFAMRIWLDP IRMAGRGVSA NDITAAIQAN NFQAAAGQTK GYLTVSNITT NTDLQNVDQF
KRMIVKAQGG GFVRMEDVAT VELAAQSTDS SVAFSGERAI FIGVQATPQG NPLNIVTGVR
ALFPEIERNL PPSMSMKVAY DSTKFIRSSI DEVEKTLIEA VGIVIVVIFL FLASFRSVII
PVVTIPLSLI GVCTAMLAMG FSINLLTLLA MVLAIGLVVD DAIVVVENIH RHLEEGKSPV
QASLIGAREI VGPVISMTIT LAAVYAPIGF LGGLTGALFR EFAFTLAGSV IVSGIIALTL
SPMMCSVLLK HQESQGWFAR KVDHVFSSIT RWYGRQLDRS LDYRPITGLF AVVILGLVGF
MYTHTSKELA PEEDQGIVFA VTKAPKYANI DYANYYGEKL DKAYASFPET DLRFILNGTS
GPNNGIAGML LKPWDERKRT AMQLKPLVQK ELSKIEGVNA FAFNLPPLPG GPGGLPIQMV
INSTAGFRAV YEEMVKLKDA ARKSGLFIVA DSDLDFNQPV VRVTIDRTKA SDLGINMQRL
GTTLATLLGG NYVNRFNLEG RSYQVIPQVP RADRLTPQSL DGFYVPSASG QQVPLSTLVT
IETATDPNAL SHFNQLNSAT FQAVPMPGVT VGQAVDFLEQ QAKNLPSGFS HDYLADARQY
VQEGNQLAIT FGFALIIIFL VLAAQFESLR DPLVIMISVP MAISGALIPL FFGVATINIY
TQVGLLTLVG LISKHGILMV EFARELQIKE ALDKRTAIEQ SARVRLRPIL MTTAAMVTGL
LPLLTASGAG AASRFSIGLV VVSGMMIGTL FTLFVLPAVY VAIGTDHRAA LESDRAKQIE
DYEMEHGSPA LKPS
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