| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4206 |
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| Symbol | |
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| ID | 6411890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4509427 |
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| End bp | 4510221 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714088 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001993177 |
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| Protein GI | 192292572 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.356132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACC TGCGTTGTCT TGCCCGGTTT GCCGCGTCCG CGGCGCTGAC CGTCAGCGTG
GCGGTGTCGC TCGCAGGTTG CAAGACCGTG GGCATGGCCG ATGTCACCGG CTCGCTCGGC
GGGCGTAACG AGGCCTCGAC CGATGCGAAC CGCGCGGTCG AGATCGCCGG TGACCGCTAC
CGGTCACGTC CCAACGATCC CGATGCGGCG ATTGCTTACG GCAACGCGCT CCGCGCGATC
GGCCAGCGCG CTCAAGCCGT CGCGGTGCTG GAGAAGGCCT CGCTCGCCAA TCCCAGCAAC
AAGGCGGTGC GGGCTGCCTA CGGCCGCGCG CTCGCCGACA ACGGCAATTT CCAATTGGCG
TTCGATACGC TGTCGCGGGC GCACAGCCCT GACAATCCGG ACTGGCGCAT CTTATCGGTG
CAGGGCACCG TGCTTGATCA GATGGGGCGC AATGAGGAAG CGCGGCGTTA CTACGCCAGC
GCGTTGCGGC TGGCGCCGGA CGAGCCCTCG GTGCTGTCGA ATCTCGGCAT GTCTTACGTG
CTGACCAAGG AACTGCCGAA AGCGGAACAG ACACTGCGGC AGGCCTACGC GAACGGCCGC
GCCGACTCGC GGGTGCGTCA AAACCTTGCG CTGGTGATCG GCCTGCAGGG GCGCTACGCC
GAAGCGGAGT CGATCGTCCG TGCCGATCTG CCGCCGGATG AGGCGGCCGC CAACGTCGCC
TATCTCAAAG AGATGGTAAG CGGTCACGAC ACCGCGCGTG CGGCAGGCCG TGGCGTGCTG
GCCTCGGGCC GCTAG
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| Protein sequence | MRDLRCLARF AASAALTVSV AVSLAGCKTV GMADVTGSLG GRNEASTDAN RAVEIAGDRY
RSRPNDPDAA IAYGNALRAI GQRAQAVAVL EKASLANPSN KAVRAAYGRA LADNGNFQLA
FDTLSRAHSP DNPDWRILSV QGTVLDQMGR NEEARRYYAS ALRLAPDEPS VLSNLGMSYV
LTKELPKAEQ TLRQAYANGR ADSRVRQNLA LVIGLQGRYA EAESIVRADL PPDEAAANVA
YLKEMVSGHD TARAAGRGVL ASGR
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