| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4144 |
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| Symbol | |
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| ID | 6411828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4438509 |
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| End bp | 4439438 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714026 |
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| Product | SMP-30/Gluconolaconase/LRE domain protein |
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| Protein accession | YP_001993115 |
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| Protein GI | 192292510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAACG TCCGCGTTCT CGCCACCGAT CTGGCGTTTC CCGAAGGCCC GGTGGTGATG
CCGGACGGCT CGGTGGTGCT GGTCGAAATC CGCGCCCAGC AACTGACGCG GGTGTGGCCG
GACGGGCGCA AGGAAGTCGT CGCCAAGGTG CCGGGCGGCC CGAACGGCGC GGCGCTCGGC
CCCGACGGCA AGATGTACAT CTGCAACAAT GGCGGCTTCG GCTGGTTTCC GTCGCGCGGC
ACGATGATGC CCGGCGCACC GGCACCGCAC GAGTATATCG GCGGCTCGAT TCAGCGGGTC
GATCTGCAGA GCGGTGAGGT CGAGACGCTG TTCGACAAAT GCGGCGAGCA CCCGCTGAAG
GGGCCGAACG ATCTCGTCTT CGACAAGCAC GGCGGACTGT GGTTCACCGA TCTCGGCAAG
CGCCGCGCCC GCGACATGGA CGTCGGCGCC GCCTACTACA TCAAGCCCGG CATGACCGAG
ATCACCGAGC AGGTGTTCGG CACGCTGCCG CTCAACGGCA TCGGCCTGTC GCCGGACGAG
GCGACGATGT ATGCGGCAGA AACTCCGACC GGCCGGTTGT GGGCGTTCGA TCTGTCGGGG
CCGGGCGAGG TGAAGCCGCG CGACGTGATC TATCGCGGCG AGAAGGGCAA GCCGATCTGC
GGGCTGGGCG GCTATCAGAT GTTCGATTCG CTCGCGGTCG AGGCGAACGG CAACGTCTGC
GTCGCCACGC TGGTGTCCGG CTGCATCTCG GTGATCGCGC CGGATGGCAC GCTGGTCGAG
CAGGTGCCGA CCGGCGACCG CGTCACCACC AACATCGCGT TCGGCGGCCC CGATCTGAAG
ACCGCCTACA TCACGTTGTC CGGCAAGGGC GAGCTGATCG CGATGGATTG GTCGCGGCCG
GGCCTGCCGC TGAACTTTCT GAACAAGTAG
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| Protein sequence | MSNVRVLATD LAFPEGPVVM PDGSVVLVEI RAQQLTRVWP DGRKEVVAKV PGGPNGAALG
PDGKMYICNN GGFGWFPSRG TMMPGAPAPH EYIGGSIQRV DLQSGEVETL FDKCGEHPLK
GPNDLVFDKH GGLWFTDLGK RRARDMDVGA AYYIKPGMTE ITEQVFGTLP LNGIGLSPDE
ATMYAAETPT GRLWAFDLSG PGEVKPRDVI YRGEKGKPIC GLGGYQMFDS LAVEANGNVC
VATLVSGCIS VIAPDGTLVE QVPTGDRVTT NIAFGGPDLK TAYITLSGKG ELIAMDWSRP
GLPLNFLNK
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