| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4034 |
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| Symbol | |
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| ID | 6411717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4324939 |
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| End bp | 4326225 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713916 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_001993005 |
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| Protein GI | 192292400 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.183286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGAA TCGTCGGCAG ATACGCAACG ATCGACGCCA GCCGGCGCGA CCTGCCGCCG
TCGAAACTGC TGCTCCTGCT GCTGGTGCTG ATGAACGGTG CGGCGCCGAT CGCGCTGTAC
ATCTTCGTGC CGGCGCTGCC GGTGCTGGCG AGCGATTTCG GCAGCGACAT CTCGGTCGCG
CAGATGACCG TGTCGCTCTA CATGGTCGGG CTGGCCTGCT CGCAGTTGAT CATGGGGCCG
TTGTCCGACC GCTTCGGCCG CCGCCCGGTG CTGCTCGGCG GGCTGGCGCT GATGGTCGCG
GCCAGCATCG GCTGCATCTT CGCGCAAACG CTGCCGCAAC TGATCGGCTT GCGCTTCCTG
CAGGCGCTCG GCGGCGCGTC GGGCATGGTG ATCAGCCGCG CCATCATCCG CGATCTCTAC
AGCCGCGACC GCGTCGGCGG CATGCTGAGT CTGGTGATCG CCGTGATGAT GATCGCGCAG
ATGCTGAGCC CGCTCGCCGG CGGCGTCATC GAAACCGCGT TCGGCTGGCG CGCGATCTTC
TATGCCGTCA CCGCCGGGGC GATCGTCGTC GCCGCCGCGA TCACGCTGGC GCTGCCGGAA
ACGAGCGGCC GCAGCACGCC CGCCGCGCAG CGCGGCGGCT TCGGCACCGA CCTCCGCAGC
CTGTTCGGCA GCCGCGCCTT CATCGGCTAC GTGCTGTGCC AGGTGCTCGC GTCGGCGATC
ATCTTCATCT TCGCCGGCGG CGGCCCCTAC GTCGTGGTGA CGCAAATGGG CCGCAGCAGC
GCCGAGTACG GCGCATGGTT CGCCAGCTCC GGCTTCGCCT ATCTGATGGG CAACGTGTTC
TGCGTGAAAT TCTCGCCGCG GCATTCGCTC GACCGTCTGA TCTGGTTCGG GCTCGGGCTG
CAGATCGCCG GCGCGTTGCT GAATCTGGCG TGGGGCATCC TCGGCTGGAA TCAGGTGCCG
AGCTGGCTGT TCGGCACCCA CATGATCATC ATGTTCGGCA ACGCCGCGGT GATGGCAAAC
GCCGCCGCCG GCGCGATCAG CATCCGCCCG CAGGCCGCCG GTACCGCATC GGGTCTGATG
GGCTTCACCC AATTCGGGTT CGGCTCGCTG TGTTCGCAGG CCGGCGCCTG GCTCGGCGGC
CATTTCGCGA CGCCGTTGCC GCTCAACATC GCGATCTTCG GGACGGCACT CGCCTGCGCC
TCAGCGATGA TCTTCCTGGT GCCGCGCCGC AACCTGATCG CGACCGAGGA ACTGATCGAG
AAGGCGGAAG AAGAGACGTT GGTGTAG
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| Protein sequence | MHGIVGRYAT IDASRRDLPP SKLLLLLLVL MNGAAPIALY IFVPALPVLA SDFGSDISVA
QMTVSLYMVG LACSQLIMGP LSDRFGRRPV LLGGLALMVA ASIGCIFAQT LPQLIGLRFL
QALGGASGMV ISRAIIRDLY SRDRVGGMLS LVIAVMMIAQ MLSPLAGGVI ETAFGWRAIF
YAVTAGAIVV AAAITLALPE TSGRSTPAAQ RGGFGTDLRS LFGSRAFIGY VLCQVLASAI
IFIFAGGGPY VVVTQMGRSS AEYGAWFASS GFAYLMGNVF CVKFSPRHSL DRLIWFGLGL
QIAGALLNLA WGILGWNQVP SWLFGTHMII MFGNAAVMAN AAAGAISIRP QAAGTASGLM
GFTQFGFGSL CSQAGAWLGG HFATPLPLNI AIFGTALACA SAMIFLVPRR NLIATEELIE
KAEEETLV
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