| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3894 |
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| Symbol | |
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| ID | 6411574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4180438 |
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| End bp | 4181553 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713776 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_001992867 |
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| Protein GI | 192292262 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGC GTGCCATTCG ATTGTGGGTG TGGGGGCATC GCTGGAGCAG CCTTGTCTGC
ACGGTGTTCG CACTGCTGCT TTGCCTCACC GGCCTGCCGC TGATTTTCAA GGACGAGCTT
GGTCCCGACC TGAAGCTCGC AGCGACGACC GCGCCGCCGG GCAGTGCATC GGTGGACTCG
ATGATCGCGC GCGCTCTCGC GGCGCGGCCG GGTGAGGTGG TGCCGTATCT GTTCTACGAT
CGGGAGCATC CGATCCTGAA GGTGCCGACC GCAGCGTCGA TGACGGCCGA CCCGGCCTCG
TTTCACTATC AGGTGTTCGA CACCCGCACC GGGCTGCAGA TCGAGATCCC GCAGCCGAAC
GAGGGCTTCC TCTATGTGAT GACGCGGCTG CATCTCGACC TTTTCGGGGG CGTGCCGGGC
ACGCTGTTTC TTGGCTTCAT GGGACTTCTT CTGGTCGTCG CGATCGTGTC GGGCGTGGTG
CTGTACGGTC CGTTCACGCG GCGGCTTGCG TTCGGTGTGG TGCGGACCGA CGGCAGCCCC
AGGCGCGCTT GGCTCGACCT GCACAATCTG CTCGGCATCG TGACGCTGGC TTGGTTTGGT
GTCGTCAGCT TCACCGGTGT CATCAATACG CTGGCAGCGC CGATCGAACT CGCCTGGCAG
GCCAATCAAC TGGTCGAGAT GGCAGCGCAG GCGAAGCCGG CTGAGATCGA GGGACAGCGT
GCTTCGACCG ACGCTGTCCT GCGTGACGTT CGCGCCGCGG TGCCGGGGAT GAACGTGATG
ACGGTGGCAT TTCCCGGCAC CCCGTTCGCG ACCCCGTCGC ACGTCGCGAT CTTTCTCACC
GGCAATACGC CGATCACCAG CCGCATCCTC AAACCGGCGC TTGCCGATGC GTCGACCGGG
CAGGTGGTCT CGGTGCGCGA CATGCCGTGG TACGCGACTG CGCTATTCAT GTCGCAGCCG
CTGCATTTCG GTGACTATGG CGGGCTGCCT CTGAAGATCA TCTGGGCGCT GCTCGACATC
GCGACGATCG TCGTTTTGAT CAGCGGTCTG TATCTGTGGT GGGCGAAGCA TCCGCGGCGT
GGCGCCGATG CGGAAGCCGG GAGCCCCGCG TCATGA
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| Protein sequence | MTRRAIRLWV WGHRWSSLVC TVFALLLCLT GLPLIFKDEL GPDLKLAATT APPGSASVDS
MIARALAARP GEVVPYLFYD REHPILKVPT AASMTADPAS FHYQVFDTRT GLQIEIPQPN
EGFLYVMTRL HLDLFGGVPG TLFLGFMGLL LVVAIVSGVV LYGPFTRRLA FGVVRTDGSP
RRAWLDLHNL LGIVTLAWFG VVSFTGVINT LAAPIELAWQ ANQLVEMAAQ AKPAEIEGQR
ASTDAVLRDV RAAVPGMNVM TVAFPGTPFA TPSHVAIFLT GNTPITSRIL KPALADASTG
QVVSVRDMPW YATALFMSQP LHFGDYGGLP LKIIWALLDI ATIVVLISGL YLWWAKHPRR
GADAEAGSPA S
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