Gene Rpal_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3872 
SymbolfolE 
ID6411552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4159653 
End bp4160342 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID642713754 
ProductGTP cyclohydrolase I 
Protein accessionYP_001992845 
Protein GI192292240 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.276085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCA AAATCAAGCC GATCCGCGGC ACCAATCCGG CCGAAGGCCG CCCCGAATTC 
CAGCCCGCCG AGCTCGAACC GTCCGAGTTC CTCGAAGTCG CGGTGCAGCC CGATCAGCCA 
CGCCCGTCCC GCGCCGAGGC TGAGGCCGCG GTGAAGACGC TGCTGTCCTA TATCGGCGAG 
AACACCGAGC GCGAGGGGCT GATCGATACC CCGCGCCGGG TGGTCGAGGC CTATGACGAG 
CTGTTCCAGG GTTATCACCA GTGCCCGAAG GAAGTGTTGG AGCGCACCTT CGGCGAAACC 
GCCGGCTATG ACGATTTCGT CCTGGTCCGC AACATCAGCT TCACCTCGCA TTGCGAGCAC 
CACGTGATGC CGTTCTACGG CAAGGCGCAC ATCGCCTATA CGCCGGTGGA GCGCGTGGTC 
GGGCTGTCGA AGCTGGCGCG CCTCGTCGAC ATCTTCGCCC GCCGGCTGCA AACTCAGGAG 
CATCTCACCG CGCAGATCGC CGCCGCGATC GACGAGGTGC TGAAACCGCG CGGCGTCGCG 
GTGCTGCTCG AAGCCGAGCA CACCTGCATG TCGGTGCGCG GCATCGCCAA GAAGGGCGCC 
ACCACCTTCA CCAGCCGTTA CACCGGCGTG TTCCGCGACA ATCCGGCGGA GCAGGCACGG 
TTCATGTCGA TGGTCAGGGA CCGCGGCTAA
 
Protein sequence
MDAKIKPIRG TNPAEGRPEF QPAELEPSEF LEVAVQPDQP RPSRAEAEAA VKTLLSYIGE 
NTEREGLIDT PRRVVEAYDE LFQGYHQCPK EVLERTFGET AGYDDFVLVR NISFTSHCEH 
HVMPFYGKAH IAYTPVERVV GLSKLARLVD IFARRLQTQE HLTAQIAAAI DEVLKPRGVA 
VLLEAEHTCM SVRGIAKKGA TTFTSRYTGV FRDNPAEQAR FMSMVRDRG