| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3828 |
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| Symbol | |
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| ID | 6411506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4112488 |
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| End bp | 4113708 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713709 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001992802 |
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| Protein GI | 192292197 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.898001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACA CGTCCAAATT CGCCGATATG GCGCTGTTCC TCGGTTTTGC CGGTGTGGTG
GCACTCGGGC CGGTCATCTT CACCCCGATC GGCGCCGGCT ATCCGGACCT GCTGCAGAAG
TTCGCGATCT ACGGCATCTT CGCGATCGGT TTCAACATCC TGTTCGGCCT CACCGGCTAT
CTCTCGTTCG GGCACGCGGC GTTTCTCGGC GTCGGTTCTT ATGCGGCGGT GTGGTCGTTC
AAGCTGGTGT CCATGGACCT GCTGCCGGCG GTGGCGTTCT CTGTCTTCCT CGCAGGCCTG
TTGGCGCTGG CGATCGGTTT CATCAGCCTG CGCCGTTCGG GCATCTACTT CTCGATCCTG
ACGCTGGCCT TTGCGCAGAT GTGCTACAAC ATGGCGTATT CGGTTCTGAC GCCGATCACC
AATGGTGAAA CCGGCCTGCG GGTGCTGCGC AACGATCCGC GTTACCTCGA CGCAGCGTTC
GGCTACGTGT CGCCGATGCC GTCGCTGCTC GGGCTCCAGA TCACCAGCTG GACCGGATTC
TACATTTGCG GCGCGGCGCT GGTAGCGGCA TTCGGCCTGT CGATCGCGAT CTTCCGCTCG
CCGTTCGGGA TGACGCTGCG CGCCATCAAA TCGAACCAGA ATCGCATGGG CTACACCGGG
TATCACAGCA GGCCGTATCT GCTCTCCGCC TTCGTGATCT CCGGCATGTT CGCCGGCTTG
GCTGGCGCCC TGTTGGCCGC GACCGATCCC CTGGCGGGCG CTGAACGAAT GCAGTGGACC
GCGTCCGGAG AGGTCGTGCT GATGACCGTT CTCGGCGGCG CCGGCACGCT TCTCGGTCCG
GTGCTGGGCA CCGGCCTGAT CAAATATTTC GAGAACATCT TTTCCGCCTA CAACGAGCAG
CAGCTTACGG CCGTGTTCTC CTTCGAGCCG GATAGCCTGC GCGAGGGGCT GGTCAAGACG
CTCAGCCTGT TCGTCGGCGA GGGCTGGCAG CTCACCCTTG GTCTACTCTT CATGGCGGTG
GTGATATTCC TGCCCGGCGG TATCATGGAA GGCGTCAACC GCCTGATCGG GCTCAAGCGC
ACGCCGAGGG TCAAATCGCT CGGCGATTCG CCGCAGCGCG ACGGCCTCGG CGAAAGCGTG
ATCGAGAACA TGCCGGCGAG CTACGGCGCA GCTCAGGCCG AACAGAAATC CGTCAAGAAA
GCAAAGGCCG CTGCACCATG A
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| Protein sequence | MKHTSKFADM ALFLGFAGVV ALGPVIFTPI GAGYPDLLQK FAIYGIFAIG FNILFGLTGY
LSFGHAAFLG VGSYAAVWSF KLVSMDLLPA VAFSVFLAGL LALAIGFISL RRSGIYFSIL
TLAFAQMCYN MAYSVLTPIT NGETGLRVLR NDPRYLDAAF GYVSPMPSLL GLQITSWTGF
YICGAALVAA FGLSIAIFRS PFGMTLRAIK SNQNRMGYTG YHSRPYLLSA FVISGMFAGL
AGALLAATDP LAGAERMQWT ASGEVVLMTV LGGAGTLLGP VLGTGLIKYF ENIFSAYNEQ
QLTAVFSFEP DSLREGLVKT LSLFVGEGWQ LTLGLLFMAV VIFLPGGIME GVNRLIGLKR
TPRVKSLGDS PQRDGLGESV IENMPASYGA AQAEQKSVKK AKAAAP
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