| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3727 |
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| Symbol | |
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| ID | 6411404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3988307 |
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| End bp | 3989416 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642713608 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001992702 |
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| Protein GI | 192292097 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.557608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAT TCCCTAGAGG TCTCCTGCTG AACGCCGCAG TCATCGCAGT CGCGCTGAGC
GTGCCAAGCC AATTGCCGGC TGCCGACGAC ATCTCCAAAC TGCCCCGCCA ACGCATCGAG
CTGGTCGCAC CGCCATTCGT CCATCCACAT CAGCAGGCCA CGACCGACGG CCCCAAAGTC
GTCGAGTTCA AGCTGGTGGT GCACGAAAAG GAACTCGTGA TCGATGACGA GGGCACGAAA
ATTCAGGCAA TGACTTTCAA CGGCTCTATC CCGGGCCCGC TGATGGTCGT GCATCAGGAC
GACTACGTCG AACTGACGCT GATCAACCCC GCTAACAACA CCATGCCTCA CAACATCGAC
CTGCACGCCG CAACGGGCGC GCTCGGCGGC GGCGCGCTGA CGCTGATCAA TCCTGGCGAG
CAGGTCGTCC TGCGCTTTAA GGCCGATCGC GCCGGCGTTT TCGTCTATCA CTGCGCGCCC
GGCGGCACGA TGATCCCCTG GCACGTCGTG TCCGGCATGA ATGGCGCGAT CATGGTGCTA
CCCCGCGACG GCCTGAAGGA CGGCGCAGGA AAGCCGCTGC GTTACGACCG CATCTACTAT
ATCGGCGAAC AGGATTTCTA TGTTCCGAAG GACGACAAGG GGAACTACAA GACATACGGG
TTGCCCGCAG AGGCATATTT CGACACCCGT GAGGTGATGC GCAAACTTAT TCCGACGCAC
GAAGTGTTCA ATGGTCGCGT CGGCGCGCTC ACCGGCAACA ACGCGATGAC GGCGAAGGTT
GGCGACACCG TGTTGATCAT CCATTCCCAG GCGAATCGCG ACACCCGCCC TCATTTGATC
GGCGGCCACG GGGACTACGT TTGGGAGACC GGCAAGTTTT CAAATCCGCC GGAAACCAAT
CTCGAGACCT GGTTCGTCCG TGGCGGATCC GCCGCCGCTG CCCTCTACAC CTTCAAGCAG
CCGGGTATTT ACGCCTACCT CAACCACAAT CTGATCGAAG GGATCGAGCT CGGCGCCAGC
GCCAATTTCA ATGTCGAAGG CAAATGGAAC GACGACCTGA TGACACAGGT GAAAGCGCCG
ACGCCGATCC CGGCAGGATC CAGTAACTAG
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| Protein sequence | MMLFPRGLLL NAAVIAVALS VPSQLPAADD ISKLPRQRIE LVAPPFVHPH QQATTDGPKV
VEFKLVVHEK ELVIDDEGTK IQAMTFNGSI PGPLMVVHQD DYVELTLINP ANNTMPHNID
LHAATGALGG GALTLINPGE QVVLRFKADR AGVFVYHCAP GGTMIPWHVV SGMNGAIMVL
PRDGLKDGAG KPLRYDRIYY IGEQDFYVPK DDKGNYKTYG LPAEAYFDTR EVMRKLIPTH
EVFNGRVGAL TGNNAMTAKV GDTVLIIHSQ ANRDTRPHLI GGHGDYVWET GKFSNPPETN
LETWFVRGGS AAAALYTFKQ PGIYAYLNHN LIEGIELGAS ANFNVEGKWN DDLMTQVKAP
TPIPAGSSN
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