| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3707 |
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| Symbol | |
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| ID | 6411384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3966672 |
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| End bp | 3967457 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713588 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001992682 |
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| Protein GI | 192292077 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.372057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCC TCGAAGGCAA ATCCATCATC ATCACCGGCG CCGGTAGCGG CATCGGCCGC
GCGGCATCGC TGCTGTTCAC CAAGGAAGGC GCGCAACTGA TCGCGGTCGA TCGCACCGAA
GGCGTGCAGG AAACGGTCGA GCAGGTGCGC AAGGCAGGCG GCACCGCCGA GGCGGTGATG
GCCGATGCAG GCTCCGAGGA TGACGTGAAG GGCTTCGTCG CCAAGGCGAT CGCCGCTTAC
GGCAAGCTCG ACGGCATCTG GGCCAATGCC GGTATCAGCG GCGGCCTGGT GCCGCTGCCC
GAACAGACGC CGGAGCATTG GCAGGAGATC CTGCGCGTCA ACCTGATCGG TCCGTTCCTG
GCGATCAAGC ACACCATGCC GCATCTGATC AAACAGGGGC ACGGCGCGAT CGTGTGCACC
GCCTCGGTCG CGGGCCTGAA GAGCGGCGCG TCGGGGCATC CCTACGCGGC GTCGAAAGCC
GGCGTGATCA GCCTGGTGCA GACTACCGCC TATTCGCTGT CCGGCACCGG CGTGCGCATC
AACGCGGTGT GTCCCGGCCT GATCGAGACC GGCATGACCA AGCCGGTGTT CGACGGCGCC
CGCGCCCGCG GCACCGATCA CAAGATCGGC CAGCTCAATC CGCTGAAGCG CGCCGGCCAG
CCGCACGAAC TCGCTACCAT GGGGCTATTC CTGCTCAGCG ATGAAGCGTC CTACGTCAAC
GGCCAGGCGT TCCCAGTCGA CGGCGGCCTG ACCGCGTCGA TGCCGTATGC GGGCAAGCCG
ATCTGA
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| Protein sequence | MGRLEGKSII ITGAGSGIGR AASLLFTKEG AQLIAVDRTE GVQETVEQVR KAGGTAEAVM
ADAGSEDDVK GFVAKAIAAY GKLDGIWANA GISGGLVPLP EQTPEHWQEI LRVNLIGPFL
AIKHTMPHLI KQGHGAIVCT ASVAGLKSGA SGHPYAASKA GVISLVQTTA YSLSGTGVRI
NAVCPGLIET GMTKPVFDGA RARGTDHKIG QLNPLKRAGQ PHELATMGLF LLSDEASYVN
GQAFPVDGGL TASMPYAGKP I
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