Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3342 |
Symbol | |
ID | 6411015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3600241 |
End bp | 3602790 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713221 |
Product | hypothetical protein |
Protein accession | YP_001992319 |
Protein GI | 192291714 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.696824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTT TTACAGCCAT CTTCGGCGCA GTTGCTTCGG CGATCGGGCT TACCGGTTTC TTCGCGACGG CCTTCGTGGC GGTCGGCGTT CTCGCCACCA CAGTCGGCAT CTCCTATCTG CTGCGCAAGA AGCCGGAGCA GGCTGCGCAG GCAGCCGAGA GCCACTTCTC TGCGCAGGGC CAGCTGCAGG CCTCCGGCGA CGTGCCGCGC AGCTTCATCG TCGGCTACAG CTTCACGGCT GGATCGCTGG TCTACGCCAA CGAGTGGGGC AATGACGGCG ACACGCCGAA CGCCTATCAC GTCCAGGTCA TCGCGCTGTC CGACCTGCCG AGCGGCCCGC TGCGCGAAGT GTGGGTCAAC GGCGAGCAGT GCACGCTGCT GTCCGGCGAG GCGCACGGCG AGTTCGGCGT TCCGCTGGCG CAGTATCGCA AGGACGGTAA GGACCATCTG TGGGTCAAGT ACTACAACGG CCGGCAAACG GCGGCCGACC CGTATCTGGT CAACCGGGTG TCGAGCGCGG ACTATCCCTA TGAGGCGACA CGCGTCGGCT TTGGCGTCGC CTATGTGATC TGCACCGCGC TGGTCGAGGA CACGCTGTTC GCCGGCTTCC CGACCTATAA GTTCGTGCCA GGCTCGATCC CGCTCTATGA TCCTTCGAAA GACACCACCG CCGGTGGCGA CGGACCGCAG CGCTGGAGCG ATCGTTCCAC CTGGGGCGGC GACGGCGACG ATCTGCCGGT AGTCCAGGCC TACAACATCC TGCGCGGCAT CAGCTACGGC GGCACCTGGT TCTACGGCGC GCAGCGCATG AGCGCAGCGC GGCTGCCGAT CACAAACTGG CTGGTGCAGA TCGCCAAGTG CCGCAACGGC GTCGAGGGCG AGAATGGGAT CGAGCCGGCC TACAGGTCTG GCGGTCAGAT CTCGGTCGAC CAGGCGCCGC TCGACATCAT CACCAAGCTC AACACCACCT GTCAGGGACG GCTGACCGAA GTCGGCGGCT TCTACAAGTA TCACGCCGGC GCGCCGGATA GTCCGTCGTT CAGCTGGACC GACGTGGATC TGCTGTCGAC CGAGGAGCAT ATGTCCCGGC CGTTCTTCTC GCTCGACAAG AGCACCAACG GCATCCAGGC GCGCTACCCG GATCCGGCGC AGGGCTGGAG CGTCGTGACG GCGCCGGCTT ATCACCGACC CGATCTCGAA GCGCGCGACG GCGGCCGGCG GCTGATGGCA ACGCCGCTGC TCGACTTCGC CCCGTATCCG GCGCAGGTGC AACGGCTGCA GAAAAGCGCG ATCGACGAGG CCCGGCGCGC TCGCACGCAC GAGCTGGCAT TCCCGCCGGT GTTCTGGCTG GTCGAGCCCG GCGACGTCGG ACAATGGACA TCGACCCGCA ACGGCTACTC GTCCAAGCTG TTCCGCGTCG ACCAGATGGT CGACCACGCC AACCTCGACG TCACCATGGC GGTGACCGAG GTCGATCCCG GCGATTACGA CTGGGATCAC GAGACCGATT ACCAGGGCGT GGCGATCGGC CCGACGACGT TCGTGCGCCC GGCGCCGCAG GGAACGCTGA GCTGGCTGGT CGAACCCTAT GTCGAGCGCG ACACAAGCGG GCTGGAACGG CGCCCGTGCA TCCGGCTGGC ATGGGACGGC ACCTTGGCGG GAATCTCCGG CGTCGCCTAT CGGGTGCGTG AGGCGGAGAG CGAAGACATC GTCGTCAGTA ATCAGACGCC GTTCTATGCC GAAGGCGCGA TCATCATCCG CGGGCTGCTC CCGGCGACCG ACTATGAAGT CGAGGCGCGG CTGATTCCGA CCGCGCCGCG CGATATGGTC CCCTCGGACT GGATGCCGGT GACAACGCCG GACGTTCGGT TGACGATGGA AGATCTCGTC GCAGGCATTC AGCATGTCAT CGCGACCCTG AAACAGGAGC GCGAGGAGAT CACTGCGATC CGCGCCGACC TGTCGAACAT GATCGCGACC GTCGCGGCGC GCGGTGTCGT CGACAAGTAT CTCTTGCACC AGGAGACTGC GGACAGCCGC GCTTCCGTCG AGGTGGTCAG CCAGGCGCTC GCCACACTCG ACGAAGCGTT CGCCTCCTAT CAGACCGAAG TGACGGCCGA GCTCGGGACG GTCTCGGCGA GTGTCACCAC GAATTCGAGT GCGATCGCGC GGCTCGACGG CTACGCGGCG GCGCGCTGGT CGGTGACGAC CAACGTGAAC GGTGCGATCA GCGGCATCGA GCTGATCAAC GGCGGCCAAT CGCTGTCTCA AATCATCTTC CAGGCCGACA AGTTCAAGTT TCAGTTGCCC GGCTACGCCA ACGGCGCGCC GCAAGACTTC CTCGTTGTCG GCCAGGTCGG CGGCGTCCCG ACATGGGGCC TCGCCGGCAA CATGGTGCTC GATGGCACTT TCACGGCGCG GATGTTCAAC GTCGCGCAGC TCTCGGCGAT CACTGCCGAT CTTGGGCACG TCACGTCCGG ATATCAGCAG AGCCCCGATG GCAAGATGAT CGCCGACTGG AACAACGGCC GGATGGAGTG GTGGGATTGA
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Protein sequence | MAIFTAIFGA VASAIGLTGF FATAFVAVGV LATTVGISYL LRKKPEQAAQ AAESHFSAQG QLQASGDVPR SFIVGYSFTA GSLVYANEWG NDGDTPNAYH VQVIALSDLP SGPLREVWVN GEQCTLLSGE AHGEFGVPLA QYRKDGKDHL WVKYYNGRQT AADPYLVNRV SSADYPYEAT RVGFGVAYVI CTALVEDTLF AGFPTYKFVP GSIPLYDPSK DTTAGGDGPQ RWSDRSTWGG DGDDLPVVQA YNILRGISYG GTWFYGAQRM SAARLPITNW LVQIAKCRNG VEGENGIEPA YRSGGQISVD QAPLDIITKL NTTCQGRLTE VGGFYKYHAG APDSPSFSWT DVDLLSTEEH MSRPFFSLDK STNGIQARYP DPAQGWSVVT APAYHRPDLE ARDGGRRLMA TPLLDFAPYP AQVQRLQKSA IDEARRARTH ELAFPPVFWL VEPGDVGQWT STRNGYSSKL FRVDQMVDHA NLDVTMAVTE VDPGDYDWDH ETDYQGVAIG PTTFVRPAPQ GTLSWLVEPY VERDTSGLER RPCIRLAWDG TLAGISGVAY RVREAESEDI VVSNQTPFYA EGAIIIRGLL PATDYEVEAR LIPTAPRDMV PSDWMPVTTP DVRLTMEDLV AGIQHVIATL KQEREEITAI RADLSNMIAT VAARGVVDKY LLHQETADSR ASVEVVSQAL ATLDEAFASY QTEVTAELGT VSASVTTNSS AIARLDGYAA ARWSVTTNVN GAISGIELIN GGQSLSQIIF QADKFKFQLP GYANGAPQDF LVVGQVGGVP TWGLAGNMVL DGTFTARMFN VAQLSAITAD LGHVTSGYQQ SPDGKMIADW NNGRMEWWD
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