| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3313 |
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| Symbol | |
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| ID | 6410986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3569969 |
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| End bp | 3571468 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713192 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001992290 |
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| Protein GI | 192291685 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTT TGACGCCCGC TGAAATGGAC CGCGCCGACC TTCTGACGAT CGCCGGAGGA
TCGTCGGGAT TCGCGCTGAT GCTGCACGCC GGCCGCCATG TCGCGCAGGC GGCGATCGAG
ATGGCGGACG AGGGGCCGAT CCTGGTGATC GCGGGCCCCG GCAATAATGG CGGCGACGGG
CTGATCGCCG CGACCGAATT AGTTGCACTC GGCCGCACCG TGCACGTGAT GCTGCTCGGC
GAGCGCGAGG CGCTGAAGGG CGATGCGGCG CTTGCGGCGC GGGAGTGGAG GGGGCCGCTG
CTGCCGTTCC TGACCCAGTC GATCGGGGCG CCGGCGCTGA TCATTGACGC GCTGTTCGGC
TCCGGCCTCA ACCGGCCGGT CAAGGATCAG GCGCTCGAGG TGATCGAGGC GGTGAACCAC
AGCGGCGTGC CGGTGCTGGC GGTCGATCTG CCAAGCGGCA TCAACGGCGC CACCGGCGCC
GTGATGGGCG CGGCAATCCG GGCGCGCGAA ACCGTCACCT TCTTCCGGCG CAAGATCGGT
CACCTCCTGC TGCCCGGCCG GCTGCATTGC GGTCAGGTCC GCCTCGTCGA CATCGGCATC
GAGCCCGGGG TGCTGGGCGA AATCCGGCCG CAGGCATTCG AAAATGACCC CGATCTGTGG
CTGCCGGACT TTCCGGTGCC GCGTGCCGAT GGCCACAAAT ACGGCCGCGG CCACGCGGTG
GTGGTGTCGG GCGAGCTGTC GCAAACCGGG GCGGCGCGGC TGGCCGCCCG CGGCGCGCTC
CGCGCCGGCG CGGGTCTGGT GACGGTGGCA TCGCCCCGCG ACGCGCTGGC CGTGAATGCG
GCGGCCCTCA CGGCGGTGAT GGTTCGGCCG GTCGATACGC CGGACGAACT CGGCACGATG
CTGGCCGACC GCCGCTTCAA CGCCATCGGC ATCGGGCCGG GCGCCGGGAT CGGTGAGGAG
ACCCGGGGCA AGGTGCTGGC GGCGCTGGCC GCTGGCGCCG CGGTGGTGCT CGATGCCGAC
GCGCTGACCA GCTTTGCCGG ACATCCGGAC GAGCTGTTCG AGGCGATCAA ATCGGCCAGT
AGTCCGCAGG TCGTTCTGAC CCCGCACGAA GGCGAATTTC CGCGCCTGTT CAGCGATATG
AGCAACAAAA ATCCACTTCG CTCGAAGCTT GAACGGGTGC GCGTAGCGGC GCAGCGTTCC
GGCGCCGTGG TGCTGCTCAA GGGCGCCGAT ACGGTGGTGG CGTCGCCGGA CGGCCGTGCG
GCGATCGCCG CCAATGCGCC GCCGTGGCTG GCGACCGCCG GCTCCGGCGA TGTGCTCACC
GGGATCATCA CCGGCCTGCT GGCGCAGCGC GTGCCGGCGT TCGAAGCCGC CTGCATCGGC
GTGTGGATGC ACGGCGAGGC GGCCTGCGAG GCCGGCCCCG GTCTGATCGC CGAGGATCTG
ACCGAGACGA TGCCGGCGGT GCATCGGCGG CTCTATGACG CGCTCGGGAT CGAGTACTGA
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| Protein sequence | MELLTPAEMD RADLLTIAGG SSGFALMLHA GRHVAQAAIE MADEGPILVI AGPGNNGGDG
LIAATELVAL GRTVHVMLLG EREALKGDAA LAAREWRGPL LPFLTQSIGA PALIIDALFG
SGLNRPVKDQ ALEVIEAVNH SGVPVLAVDL PSGINGATGA VMGAAIRARE TVTFFRRKIG
HLLLPGRLHC GQVRLVDIGI EPGVLGEIRP QAFENDPDLW LPDFPVPRAD GHKYGRGHAV
VVSGELSQTG AARLAARGAL RAGAGLVTVA SPRDALAVNA AALTAVMVRP VDTPDELGTM
LADRRFNAIG IGPGAGIGEE TRGKVLAALA AGAAVVLDAD ALTSFAGHPD ELFEAIKSAS
SPQVVLTPHE GEFPRLFSDM SNKNPLRSKL ERVRVAAQRS GAVVLLKGAD TVVASPDGRA
AIAANAPPWL ATAGSGDVLT GIITGLLAQR VPAFEAACIG VWMHGEAACE AGPGLIAEDL
TETMPAVHRR LYDALGIEY
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