| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3283 |
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| Symbol | |
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| ID | 6410953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3531784 |
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| End bp | 3533454 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713159 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001992260 |
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| Protein GI | 192291655 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.820283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTC CGGACGAGTT TACATTTGCG CCGCTCGGCG GCGTCGGCGA GATCGGCATG
AACCTGTCGA TCTATGGCCT TGGCACTCGC CATCAGCGGA GCTGGCTGGC GGTCGACCTC
GGCGTGTCGT TCGGCGACGA GGAGCATCTG CCCGGCATTG ATCTGATCAT GCCGGACGTC
CGCTTTCTCG AAAAAGAGAA GAAGAACCTG GTCGGGCTGG TGCTGACGCA CGCCCACGAG
GACCATTTCG GCGCGATCAT CGATCTGTGG CCGAAGCTCG GCTGCCCGAT CTACGCCACC
AAGTTCAGCG CCTCGCTGTT CGCCGCCAAG CTGGCGGCCG AACGCACCAC GCTGAAGATC
CCGATCACCG AAGTGCCGTC GGGCGGCACG ATTGATCTCG GCCCGTTCAG CGTCGAGTTC
ATCCCCGTGG CGCATTCGAT TCCGGAGAGC CATGCGCTGG CGATCCGCAC CTCGGTCGGC
ACCGTGCTGC ACACCGGCGA TTGGAAGATC GATCCGACGC CTGTGGTCGG ACCGCCGACC
GACGAGGCGC GGCTGCGTCA GCTCGGCGAC GAAGGCGTGC TGGCGCTGAT CGGCGACTCC
ACCAACGCGG TGCGTGACGG TCGCTCGCCG TCGGAGGCCG AAGTCGCAGT CTCGCTCGCC
GGCCTGATCA AATCCGCCAA GGGCCGCGTC GCGGTGACGA CCTTCGCATC CAATGTCGGC
CGTATCCGCG CCGTCGCCGA TGCGGCGAAG GCTGCGGGGC GCGAAGTGGT TCTGGTCGGG
CGCGCGATGG ACCGCGTCGC GCAGGTCGCG CGTGAGACCG GGCATCTCGA TGGCGTGCAG
AGCTTCCGCG GGCCCGAATA TTACGGGCAT TTCCCGCCCG ACAAGGTGCT GGCGCTGTGC
ACCGGCAGCC AGGGTGAGCC GCGCGCCGCA CTGGCGCGGA TCGCCAAGGA CGATCACCCC
GAGATCACCC TCAACAAGGG CGACTGCGTG ATCTTCTCGT CACGCACCAT TCCGGGCAAC
GAGAAGGCGG TCGGCAGCAT CATCAACGGG CTGGTGACGC AAGGCATCGA GGTGATCACC
GATCGCGATC ATCTCGTCCA CGTCTCCGGC CATCCGCGTC GCGACGAGCT GCGCGAGATG
ATCTCCTGGG TGCGGCCGCA ACTGCTGATC CCGGTGCACG GCGAGGCGCT GCATCTCAAC
GAACACGCCA AGCTGGCGCG GCAGATGGGC GTGCCCAAGG TGATGACTTG CCGCAACGGC
AACCTGATCC GTCTCGGGCC GGGCGATCCG GCGGTGATCG ATCAGCTGCC GTCGGGCCGG
CTGTACAAGG ACGGCACCAT CCTCGAGCAG GACACCTCGC GCGCCGTCGT CGAGCGCCGC
AAGATGGCGT TTGCCGGCTG CGCCTTCGTG GCGCTGGCGC TGACCGAGAC CGGCGAACTT
GCTGACGACC CGGAGGTCGA TCTGGTCGGC ATGCCGGAGA ACAACACCGC TGGCGAACCG
CTCGAAGACA TTGTGTTCGA TGCAGTCGTC TCCACCGTCG AGGGGCTGCC GCGGGCGCGG
CGGCGCGATC CGGACGCCGT CGCGGAATCG GTGCGACGCA CGGTCCGCTC GATCGTCCAG
GCGGAATGGG GCAAGAAACC TTTGTGCACG GTGCACGTGC TGACGGTTTG A
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| Protein sequence | MARPDEFTFA PLGGVGEIGM NLSIYGLGTR HQRSWLAVDL GVSFGDEEHL PGIDLIMPDV
RFLEKEKKNL VGLVLTHAHE DHFGAIIDLW PKLGCPIYAT KFSASLFAAK LAAERTTLKI
PITEVPSGGT IDLGPFSVEF IPVAHSIPES HALAIRTSVG TVLHTGDWKI DPTPVVGPPT
DEARLRQLGD EGVLALIGDS TNAVRDGRSP SEAEVAVSLA GLIKSAKGRV AVTTFASNVG
RIRAVADAAK AAGREVVLVG RAMDRVAQVA RETGHLDGVQ SFRGPEYYGH FPPDKVLALC
TGSQGEPRAA LARIAKDDHP EITLNKGDCV IFSSRTIPGN EKAVGSIING LVTQGIEVIT
DRDHLVHVSG HPRRDELREM ISWVRPQLLI PVHGEALHLN EHAKLARQMG VPKVMTCRNG
NLIRLGPGDP AVIDQLPSGR LYKDGTILEQ DTSRAVVERR KMAFAGCAFV ALALTETGEL
ADDPEVDLVG MPENNTAGEP LEDIVFDAVV STVEGLPRAR RRDPDAVAES VRRTVRSIVQ
AEWGKKPLCT VHVLTV
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