| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3260 |
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| Symbol | |
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| ID | 6410930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3505637 |
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| End bp | 3508162 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713136 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001992237 |
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| Protein GI | 192291632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG GAATGCGAGT GTTGCGGGGG GTAGTCGGTG CCGCCCTGGT GTTTTTCGCC
GTACCGGTCG CCACGACGGC GGTCGGGGTG GTGATGGCGT CTCCTGCCGC CGCCCAATCC
GCTTCGTCGA TCGCGGTCGA GGGCAACCGG CGGGTCGAGG CTGAGACCAT TCGCTCCTAT
TTCAAGCCGG GTCCGGGCGG GCGGCTCGAC CAAGGCTCGA TCGATGATGG CCTCAAGGCG
CTGATCGAGA CTGGTTTGTT CCAGGACGTT CGCATCAATC AGGCGGGCGG GCGTCTGGTC
GTCAGCGTCG TCGAAAACCC GGTGATCGGT CGCCTCGCAT TCGAGGGCAA TAAGAAGATC
AAGGACGAGC AGCTCTCGGC TGAAATCCAG TCGAAGCCGC GCGGCACGCT GTCCCGCCCG
ATGGTGCAGG GCGACGCGCT GCGGATCGCC GAGATCTATC GCCGCTCTGG TCGCTACGAC
GTCCGCGTCG ACCCGCAGAT CATCGAGCAG CCGAACAACC GCGTCGACCT GGTGTTCGTG
ATCACCGAAG GTCCGAAGAC CGGTGTGAAG TCGATCGAGT TCGTCGGCAA CAAGGCCTAT
TCGTCCTATC GTCTGAAGGA CGTGATCAAG ACTCGCGAGA GCAACCTGCT CAGCTTCCTC
GGCAACGGTG ACGTGTACGA TCCGGACCGG GTCGAGGCCG ACCGTGACCT GATCCGCCGC
TTCTACCTGA AGCACGGCTT CGCCGATGTG CAGGTGGTGG CCGCGCTGAC CGAATACGAT
CCGGAGCGCA AGGGCTTCCT GGTCACCTTC AAGATCGAGG AAGGCCAGCA GTACCGCGTC
GGTTCGGTGA CCTTCGAATC CGCCATTCCG ACCCTCGACG GCAACTCGAT GCGCAGCTTC
TCGCGCGTCA ATGTCGGCTC GCTCTACAAC GCCGAGGCGT TGGAGAAGTC GGTCGAAGAG
ATGCAGATCG AGCTATCGCG TCGCGGCTAC GCGTTCGCGA CCGTGCGTCC GCGCGGTGAC
CGCAATTTCG ACGAGCATAC CGTTTCGATC GTGTTCTCGA TCGAAGAGGG GCCGCGCGTT
TACATCGAGC GCATCAACGT CGTCGGCAAC ACCCGGACCC GCGATTACGT GATCCGTCGT
GAGTTCGATA TCTCCGAAGG CGATGCCTAC AACCGTGCGC TGGTCGATCG CGCCGAGCGC
CGGCTGAAGA ACCTCGACTT CTTCAAGACC GTGAAGATCA CCACCGAGCC GGGCTCTTCG
AGCGACCGGG TCATCCTGGT GGTCAACCTC GAAGAAAAGT CGACCGGCGA CTTCTCGGTG
TCGGGTGGTT ACTCGACCAG CGACGGTGCG CTGGGCGAAG TCTCGGTCTC GGAACGCAAC
TTCCTCGGCC GCGGCATCTT CGCCAAAGCG TCGGTGCAGT ACGGTCAGTA TGCCCGCGGC
TACTCGCTGT CGTTCGTCGA GCCGTATCTG CTCGACTACC GCGTCGCGCT CGGCCTCGAC
CTGTATCAGC GCGAACAGCT CGCCAACCGC TACATCTCGT ACTCGACCAA GACGCTCGGC
TTCAGCCCGC GCCTCGGCTT CGCGCTGCGG GAAGATCTGT CGCTGCAGAT CCGTTACTCG
CTGTACCGGC AGGAAATTAC GCTGCCGTCG TACCTGAACA ATTGTAACAA CATTCCGGGC
CCGGGCTTCT TCCCGACGCC GCAGTACATC GCCGCAAATA ACCTGCAGGC CACCTACGGC
GTGCTAGGTT GCTACGGCGA CGGCGAAGCC TCGCTGCCGG TCCGCATCGG TCTGGCTGGC
GGTGCCTACT GGACCTCGTC GCTCGGCTAT ACGTTGACCT ACAACACCCT CGACAACATC
AAGAACCCGA CCGACGGTCT GCTCGTCGAC CTGCGTCAGG ACTTCGCTGG TGTCGGCGGC
GACGTGAAGT TCATCAAGAC CGCGTTCGAC GCCAAGTACT ACACCTCGCT GGTGTCGGAC
TTGGTCGGCT TGATCCACCT GCAGGCTGGT AATCTGAGCA CCTATGGCGA CAACCAGCTG
CGGATGCTCG ACCACTTCCA GATGGGTTCG AACCTGGTTC GCGGCTTTGC GCCGAACGGT
ATCGGTCCGC GCGACATCGG CCAGTATGCG CTGTACGGCT ACGGCGGCGA CGCCCTCGGC
GGCACCAACT ACTGGGGCGC GTCGGTCGAG TTGCAGATGC CGTTCTGGTT CCTTCCGAAG
GAAGTCGGGC TCAAGGGCGC CGTCTATGCC GACGCAGGTT CGCTGTTCGA CTACAAGGGC
CCGACGTCGT GGTCGGTCAC CGGCGAAGTC AACACGCCCG GCTGTATCCC GGCGAGCCAG
ACCACGATCG GCACCTGCTC GGGTCTGAAC TACGACGACA CCAACCTCGT CCGCACCTCG
GTTGGTGTCG GCCTGATCTG GGCGTCGCCG TTCGGTCCGC TGCGCTTCGA CTACGCGATC
CCGATCACCA AGGGTAAGTA CGACCGCGTT CAGGAGTTCA AGTTCGGCGG CGGGACCTCG
TTCTAA
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| Protein sequence | MKVGMRVLRG VVGAALVFFA VPVATTAVGV VMASPAAAQS ASSIAVEGNR RVEAETIRSY
FKPGPGGRLD QGSIDDGLKA LIETGLFQDV RINQAGGRLV VSVVENPVIG RLAFEGNKKI
KDEQLSAEIQ SKPRGTLSRP MVQGDALRIA EIYRRSGRYD VRVDPQIIEQ PNNRVDLVFV
ITEGPKTGVK SIEFVGNKAY SSYRLKDVIK TRESNLLSFL GNGDVYDPDR VEADRDLIRR
FYLKHGFADV QVVAALTEYD PERKGFLVTF KIEEGQQYRV GSVTFESAIP TLDGNSMRSF
SRVNVGSLYN AEALEKSVEE MQIELSRRGY AFATVRPRGD RNFDEHTVSI VFSIEEGPRV
YIERINVVGN TRTRDYVIRR EFDISEGDAY NRALVDRAER RLKNLDFFKT VKITTEPGSS
SDRVILVVNL EEKSTGDFSV SGGYSTSDGA LGEVSVSERN FLGRGIFAKA SVQYGQYARG
YSLSFVEPYL LDYRVALGLD LYQREQLANR YISYSTKTLG FSPRLGFALR EDLSLQIRYS
LYRQEITLPS YLNNCNNIPG PGFFPTPQYI AANNLQATYG VLGCYGDGEA SLPVRIGLAG
GAYWTSSLGY TLTYNTLDNI KNPTDGLLVD LRQDFAGVGG DVKFIKTAFD AKYYTSLVSD
LVGLIHLQAG NLSTYGDNQL RMLDHFQMGS NLVRGFAPNG IGPRDIGQYA LYGYGGDALG
GTNYWGASVE LQMPFWFLPK EVGLKGAVYA DAGSLFDYKG PTSWSVTGEV NTPGCIPASQ
TTIGTCSGLN YDDTNLVRTS VGVGLIWASP FGPLRFDYAI PITKGKYDRV QEFKFGGGTS
F
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