| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3075 |
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| Symbol | |
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| ID | 6410746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3321546 |
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| End bp | 3322526 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642712955 |
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| Product | putative phage tail collar domain |
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| Protein accession | YP_001992056 |
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| Protein GI | 192291451 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4675] Microcystin-dependent protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.242473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTT ACAAATGGTC GCAGACCGCA GCGAACAACG CAAACGCTGA TGGAACTTGT
CCATTCCCCG AGGGCATGAG CCCGGCTGCG GTAAACGACG GCGCGCGCGG GCTGATGGCT
GCTGTTGCGA AGTATCGCGA CGACCTATCG GGCATGATCG TCACCACGGG GACGCCATCG
GCTTACGCCG TCGCAACAAA TCAGGTGTTC GACACCCTGG CACATTTCCA CAATCAGGTG
ATCGCGTTCA CGCCGCATAT CACCAACTCG TCTGGTCCGG TGACGATGTC AGTTGACAAC
TTCACCAATC TTCCGCTGCG GATGTCTCCG GGGGTTGAGT TGCCCGATGG CACGCTGATC
CAAGGCACGC CTTACGCTGC GAAATACAAC AACACTGACG GATCGCTCTA CCTGTTGGGG
TTCATGAGCA GTCCCTACAA TGTGCCACTG TTCGGCGGTC TCGACTATTG GGACACGGTC
GCGCCGAATA GCAGCTTCAT TTTCCCACTT GGGCAGGAGC TTTCCCGGAC GGTCTATTCC
AAAGCCTTCG CGCGGTGGGG AACGAAGTTC GGCGTCGGCA ACGGATCAAC CACATTTAAC
GCACCGAACA AGGCGGGGAG AGTGTCGGCA ATGATCGAGC CGTCACCCTC GCTACTAACC
TCCGTCTATT TTGGCGGGAA TTCGGCTGTG ATTGGTTCAA TCGGTGGCGC CGAAAGTCAT
GCCCTGCAGC CTACAGAGGG GCCGACCCAC ACGCACGGAA TTACTGATCC GGGCCACGAT
CACCCTTACG GGGCCGGCCA GCCGCAGAAC CTATCGACTG GCGGTTCAAA CCTAGGATTG
GTGTCGGCTG CGAACGGTAA CGGCGCATAT ACTTCCGGCA AAGGAGTGAC GGGAATTACT
ATCAACAACG CGGGCGAGGG AAAACCGCAC CTGAACTGTC AGCCGACGAT CACCTGCAAC
TACATCATTC GAGTTTTGTA A
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| Protein sequence | MTLYKWSQTA ANNANADGTC PFPEGMSPAA VNDGARGLMA AVAKYRDDLS GMIVTTGTPS
AYAVATNQVF DTLAHFHNQV IAFTPHITNS SGPVTMSVDN FTNLPLRMSP GVELPDGTLI
QGTPYAAKYN NTDGSLYLLG FMSSPYNVPL FGGLDYWDTV APNSSFIFPL GQELSRTVYS
KAFARWGTKF GVGNGSTTFN APNKAGRVSA MIEPSPSLLT SVYFGGNSAV IGSIGGAESH
ALQPTEGPTH THGITDPGHD HPYGAGQPQN LSTGGSNLGL VSAANGNGAY TSGKGVTGIT
INNAGEGKPH LNCQPTITCN YIIRVL
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