| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3025 |
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| Symbol | |
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| ID | 6410696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3287489 |
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| End bp | 3288544 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712905 |
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| Product | integrase family protein |
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| Protein accession | YP_001992006 |
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| Protein GI | 192291401 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.282849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGAA TAAAACGCAA GCCGCTTAAG CTCAAAGGCA TCAAGCGGGT TGCAATGAAG
CTCGCTGATG GTTCGGTTCG CGTGTATTTG TACCACCGAG CCACCGGCGA GCCGCTGGAC
GAAAGCCGGC TGGTCGAGAG CTACGCAGAG GCCGAAAAGA AGAAGCGGCG TCGCGGCGGC
AAGACGCTAA CTGACCTGAT CAGGTTTTTC GACACGTCCG AGACGTTCGC CTCATTGAGC
GCCGAGCACC GGAAGCAATA CGTCTGGAAG TTCGCGCGGA TCGAAAAGAA GTGGGGCACC
GTCCCCGAAG ACACCTTCAA CAATCAGGAC GACGCCGACG CCTTCGCCGC CGACGCACTC
GCGTGGCACC AGGAGATCGG CAAGACCTCG CGCCGATCGG CTGACAACCT CATGTCGGCG
CTATGCCGCG CTCTCAGCTT CGCGAAGGAA AAGCGGCGCA TCAAATTTCA CCCGATCCCG
AGTTTCGAGC GGCTGTACAA GAGCGAGCGG GCCGACAAGG TATGGCCGCC CGAGCTGCAG
CAGAAGTTCA TCAGCACCGC CCGGCCGGCG ATGCAAACCG CGATGATTCT GGTCCGGAAC
ACCGCCATGC GCGCGATCGA CATTCGCGGA TTCGCCTGGA CCCGCTACGA CGGCCAGCGC
GTGCAGATCC GGTCACACAA GACGGGCAAA TGGCTTTGGA TACCGGCCAC CCGAGAGCTG
CGCGCGCACC TGGACTGCCT AAAGCGGACG GGAGCCCTGG TGCTGCTCAC ACCCAGCGGC
AAAGCCTACA CCCGCCGGTA CTTCAACGAG CACTTCCGCG AGGATGCCGA CGCGATCGGC
GCCGGCGATC TGAATTTCCA CGACAACCGC GGCACGGCAG CAACGCTGTT GGCCGAGGCC
GGCGCCACGG CGCCAGAGAT CGCCGAGGCG CTGACCTGGA CCGTGGACAA GGCGCAGCGC
ATCATAGACG CCTATTTGGC CCGCCGCGGC GTGCTGGCGG CGAACGCCAT CGCGAAGCTG
GAAGACTACC GGGACCGTCA GGGGAAGCAG CCATGA
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| Protein sequence | MPRIKRKPLK LKGIKRVAMK LADGSVRVYL YHRATGEPLD ESRLVESYAE AEKKKRRRGG
KTLTDLIRFF DTSETFASLS AEHRKQYVWK FARIEKKWGT VPEDTFNNQD DADAFAADAL
AWHQEIGKTS RRSADNLMSA LCRALSFAKE KRRIKFHPIP SFERLYKSER ADKVWPPELQ
QKFISTARPA MQTAMILVRN TAMRAIDIRG FAWTRYDGQR VQIRSHKTGK WLWIPATREL
RAHLDCLKRT GALVLLTPSG KAYTRRYFNE HFREDADAIG AGDLNFHDNR GTAATLLAEA
GATAPEIAEA LTWTVDKAQR IIDAYLARRG VLAANAIAKL EDYRDRQGKQ P
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