Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2812 |
Symbol | |
ID | 6410478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3057421 |
End bp | 3057972 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642712690 |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_001991796 |
Protein GI | 192291191 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCACG GCCCCGTGCC CGGCCAGCCG GACCCGACCA GCGCCGCGCA GCGCGAGACC GGCGGCCCGC TCGGCCACGC GCTGGCGCTG GTCAACCGAG CCATCCTCGT CCTCGCCGCG GTCGCGCTGG TGGTCGCCTG CTGCATCCTC AGCTACAGCG TGGCGGTACG CAGCCTGTTC CACAGCGCCA CCTATTGGCA GGACGAGGCC GCGGTGTTCC TGCTGGTCGG CGCCACCTTC CTGACCGCCG CCTTCGTGCA AAGCCAACGC GGCCATATCG GCATCGAGGC GTTCACCGGG CTGCTGCCGC CGGCCGTGAA CCGCGTCCGG CTGCTGCTGG TCGACGTCGC CAGCCTCGCC TTCTGCGGCT TCTTCGCCTG GAAATCCTGG ACGCTGACGC ACGAGGCCTA TGTCGACGGC CAGGTCTCGA ATTCGATCTG GTCGCCGCCG CTCGCCATCC CCTACGCGCT GATGGCCGCC GGCATGACGC TGCTGTGCCT GCAGATCGCG GTGCAGATCG TGAACTCCTT CAGTGGGACG AAGCGCGCGT GA
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Protein sequence | MMHGPVPGQP DPTSAAQRET GGPLGHALAL VNRAILVLAA VALVVACCIL SYSVAVRSLF HSATYWQDEA AVFLLVGATF LTAAFVQSQR GHIGIEAFTG LLPPAVNRVR LLLVDVASLA FCGFFAWKSW TLTHEAYVDG QVSNSIWSPP LAIPYALMAA GMTLLCLQIA VQIVNSFSGT KRA
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