Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2576 |
Symbol | |
ID | 6410238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2785561 |
End bp | 2786637 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712454 |
Product | nuclease (SNase domain protein) |
Protein accession | YP_001991564 |
Protein GI | 192290959 |
COG category | [L] Replication, recombination and repair [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.901293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTCT TCTCGAAAAT GACGATCGGC ATGGCGGCCG CAGCCACGAT CGCGCTCGCT CCTGGTGGAG CGGACGCGCG GGGGTGGGAC ACCGTGCACC GCTTCGTGCA CAAGACAGGC AAGTGCGGTG CGGGCAAAGA GGTCCTGGCG TCGCTGTATA CGATCGGTTC GCGGACGAGC AGCGGCGAAC CAATGAACCA TGACGGCTTG ACCGCAGCCT CCCACGAATA CCCCCTCGGC ACCACCGTTG TGGTCACCAA CCCGGCGAAC GGTCGAAGCT GCAGCATTCG GGTCAACGAT CGCGGCCCCT ACGGAAAGCC GCGTGACCTC GGCGTAAAGA TCGACTTCAC CCTCGGATCG GCACGGTGCC TCGGCATGCG TGGGACGCAG TATGTCTGCC TGCCGGGTGA AGAGCCGATC GAGATCGCCG GCATTCCGCT GGTGATCGAC GGCAACACGG TGGAGATCAG CGGCACGAAA ATTCGGCTGC AGGGGATCGA CGCGCCGGAA ACCGATCAGC TGTGCGTCGA CGAGAAGGGC ACCGGTTGGA CCTGCGGCCT TGCGGCTCGT GACGAACTCG CCAAGCGCTT CGGCGAGAAG CCCTGGACGT GCCAGGTCGC GGGTCACGAC AAATACGGCA GGTCGCTCGG TAGCTGTGCT GTGAATGCGG AGAGCGTTGA AGAATGGATG GTGCGCTCCG GCTGGGCCGT GGCGCTGGTT CGCTCGGCGC GCGCCTATGA GGCCGCCGAG GTCATTGCGC GGGACGCGCA ATCCGGCCTG TGGTCGGGCG CCTTCATCAT GCCGTCCGAT TGGCGGAATC GAAACCAACA GACCACCATC GTCGGAGCCG CCAACGTGCC GAGCAGCGCC CTGGAAATCC TGCGCGGCGC AGCATCAGTT GCCGAAGCGC CATCGCCGGA ATGCGTCATC AAAGGCAATA TCGGCAAAGG CGGCCAGTGC ACTTACCAGC AGCCGGGCAG TCACCTGTAC GCGAAGCTGA AGATGGGTAC GGGCAAGCGC TGGTTCTGCA GCGTCAAGGA AGCAGAGACG GCGGGGTGCC GGGCGGTCAA GAAGTGA
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Protein sequence | MRFFSKMTIG MAAAATIALA PGGADARGWD TVHRFVHKTG KCGAGKEVLA SLYTIGSRTS SGEPMNHDGL TAASHEYPLG TTVVVTNPAN GRSCSIRVND RGPYGKPRDL GVKIDFTLGS ARCLGMRGTQ YVCLPGEEPI EIAGIPLVID GNTVEISGTK IRLQGIDAPE TDQLCVDEKG TGWTCGLAAR DELAKRFGEK PWTCQVAGHD KYGRSLGSCA VNAESVEEWM VRSGWAVALV RSARAYEAAE VIARDAQSGL WSGAFIMPSD WRNRNQQTTI VGAANVPSSA LEILRGAASV AEAPSPECVI KGNIGKGGQC TYQQPGSHLY AKLKMGTGKR WFCSVKEAET AGCRAVKK
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