Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2569 |
Symbol | |
ID | 6410231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2775456 |
End bp | 2776754 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712447 |
Product | acetylornithine deacetylase |
Protein accession | YP_001991557 |
Protein GI | 192290952 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.999576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACTG AGACATTGAC CAAATCGGAT GCGATCACAC AAAGCCTGCG GGCTGCGGTC GATCGCAATT TCAACGACCA GGTCGCGTTT CTCCAGCGCA TGGTGCAGTT CCGCAGCGTG CGCGGCGAAG AGGCGCCGCA GCAGGAATGG CTGGCGCAGC AGTTCGCCGA CCGTGGCTAC AAGGTCGACA CCTTCAGTCT CGCCGACGTC GATATCGCCA GCCATCCTAA GGCGGCGCCG ATGGACACGA TCGATCCGGC CGGCTCGATG CAGGTCGTTG CCACCGCGGA CAGCGACGGC AAGGGCCGCA GCCTGATCCT GCAGGGCCAT ATCGACGTGG TGCCGGAAGG GCCGGTCGAT CTGTGGGGCG ATCCGCCCTA CGAGGCGAAG GTCCGCGACG GCTGGATGAT CGGTCGCGGC GCGCAGGACA TGAAGGGCGG CGTGTCGGCG ATGATCTTCG CCCTCGATGC GATCCGCACC GCCGGCTACG CCCCCGATGC GCGCGTCCAT GTGCAGACGG TGACCGAAGA GGAGAGCACC GGCAACGGCG CGCTCTCGAC CTTGATGCGC GGCTATCGCG CCGATGCCTG CCTGATCCCC GAACCGACAG GCCACACCCT GACGCGCGCC CAGGTTGGCG CGGTCTGGTT CCGGCTGCGG GTGCGCGGCA CGCCGGTTCA CGTCGCTTAC TCCGAGACCG GCACCAGCGC GATCCTGTCG GCGATGCATC TGATCCGCGC ATTCGAGGAA TACACCAAGG AGCTGAACGC CCAGGCGGTG CGCGATCCGT GGTTCGGCCA GGTCAAGAAT CCGATCAAGT TCAACGTCGG TATCATCAAG GGCGGTGATT GGGCGAGCTC GACTGCCGCG TGGTGCGAAC TCGACTGCCG GCTCGGCCTG CTCACCGGCG ATACGCCGCA GGAGGCGATG CGCGGCATCG AGAAGTGTCT GGCCGATGCT CAGGCGACCG ACAGCTTCCT GTCGGAAAAT CCGGCCGAAC TGGTCTGGAG CGGCTTCCAG GCCGATCCGG CGGTGTGCGA GCCGGGCGGG GTGGCTGAAG ACGTTCTCAC GGCTGCGCAC AAGGCCGCGT TCAACGCACC GCTCGACGCG CGACTTTCGA CGGCGGTCAA CGACACTCGT TACTACTCGG TCGACTACGG CATTCCGGCG CTGTGCTACG GACCGTACGG CCAGGGGCCT CACGCGTTCG ACGAGCGCAT TGATCTCGAA AGCCTGCGCA AGACGACGCT GAGTATCGCA TTGTTCGTCG CAGAATGGTG CGGGCTGAGG AAGCTGTGA
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Protein sequence | MATETLTKSD AITQSLRAAV DRNFNDQVAF LQRMVQFRSV RGEEAPQQEW LAQQFADRGY KVDTFSLADV DIASHPKAAP MDTIDPAGSM QVVATADSDG KGRSLILQGH IDVVPEGPVD LWGDPPYEAK VRDGWMIGRG AQDMKGGVSA MIFALDAIRT AGYAPDARVH VQTVTEEEST GNGALSTLMR GYRADACLIP EPTGHTLTRA QVGAVWFRLR VRGTPVHVAY SETGTSAILS AMHLIRAFEE YTKELNAQAV RDPWFGQVKN PIKFNVGIIK GGDWASSTAA WCELDCRLGL LTGDTPQEAM RGIEKCLADA QATDSFLSEN PAELVWSGFQ ADPAVCEPGG VAEDVLTAAH KAAFNAPLDA RLSTAVNDTR YYSVDYGIPA LCYGPYGQGP HAFDERIDLE SLRKTTLSIA LFVAEWCGLR KL
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