Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2552 |
Symbol | |
ID | 6410214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2759719 |
End bp | 2760810 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712430 |
Product | transport system permease protein |
Protein accession | YP_001991540 |
Protein GI | 192290935 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.822821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACGC TCGACACTGC CATGGTTCGA TCCGGGCGCC CCGCCACATC CACTGTCGTT GTCGCTGCGC TTGTTTTCCT GCCGATCGTC ACGGCGCTGC TCTGTCTATC CGCCGGCCGC TATCAGGTGC CGACCACTCA TGTGTTCGGC ATTCTGCTGG ACGAGCTGTT CGCTCGGTTC GGCCTCAATG CAGCGGACTG GTTGCCGGCG GGGTGGGGCA CCGCGAGTTG GACGCCGACG GAGCGGATCG TCGTCACCAC GGTGCGGCTA CCACGGGTCT TGATGGCCGG CATCGCCGGA GCTGGCCTCG CGTTGTCGGG AGCGGTGCTG CAGGGCATGT TCCGCAATCC GCTGGTCGGT CCGCAGACCA TCGGCGCCGC GTCCGGCGCG TCGCTCGGCG GCGTGGTCGC GATCCTGTTG TTCGGCTTCG GCTTGCCGGT GCATCTCGGC GCGTTTGCCG GTGCCGCAAT CGCGCTCGCC GCGGTGCTGA TCATTCATCG CGGCGATGGT GTCTCACCGG TGCTGACGCT GGTGCTCGCC GGCGTCGTGA TCGGCGCATT CTGCAGCGCT TTGGTCGGGT TCGTCACTTT CATCGCCGAT CCCGAGGTGA AGCTGCCCGG CATCGTATTC TGGCTGCTCG GCAGCTTTGC AGCGTCGAGC TGGCCGAACC TGATGCTGCT GGCGACGTGT ACCATCCTGG GCGGCGGCGT GATGCTGGCG ATGCGCTGGC GCGTCAACGT GCTGTCGCTC GGCGACGAGG AGGCGCGCAC GCTCGGCGTC GAGCCCGGGC GCGACCGTGT GATCCTGCTT ACCGCGACCT GTCTGGCGAT CTCGGCGCAG GTCGCGGTCT CCGGCACGAT CGGCTGGGTC GGCCTGGTGA TCCCTAATTT GGTGCGGATG GTGGTCGGCG CCGATCATCG CCGGTTGCTG CCGGTGTCGG CGGTGGCGGG CGCGGCGTTC CTGATGGCGG CCGATACGCT GGCGCGCGAC CTGTCGGCGG CCGAAATTCC GGTCGGCATC GTTACCGCGA TCGTCGGCAC GCCGGTGTTC GCGTGGCTGC TGCGCCGACA TGCGAGAGGA CAGACGGCAT GA
|
Protein sequence | MSTLDTAMVR SGRPATSTVV VAALVFLPIV TALLCLSAGR YQVPTTHVFG ILLDELFARF GLNAADWLPA GWGTASWTPT ERIVVTTVRL PRVLMAGIAG AGLALSGAVL QGMFRNPLVG PQTIGAASGA SLGGVVAILL FGFGLPVHLG AFAGAAIALA AVLIIHRGDG VSPVLTLVLA GVVIGAFCSA LVGFVTFIAD PEVKLPGIVF WLLGSFAASS WPNLMLLATC TILGGGVMLA MRWRVNVLSL GDEEARTLGV EPGRDRVILL TATCLAISAQ VAVSGTIGWV GLVIPNLVRM VVGADHRRLL PVSAVAGAAF LMAADTLARD LSAAEIPVGI VTAIVGTPVF AWLLRRHARG QTA
|
| |