Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2339 |
Symbol | |
ID | 6410000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2522993 |
End bp | 2524444 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712218 |
Product | hypothetical protein |
Protein accession | YP_001991329 |
Protein GI | 192290724 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.562692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGACC TCATCACCGC CAAAGCCCTG GCCAAAGCCA TCCGCGACCA GCGCGAAGGC CAGCGCTACG ACATCATCGA TAGCCGGGTC CCGGGGCTCG AGCTCCGCGT GAAGCCGCGC GGCGTACGGT GGTCGATGCG GTGCCGGCTC CATGGCGACC GGAAGCGCTA CGACCTGGGG CCGGCCGTCG CCGGCGACCA GGACATCGGC GGCCTGTCGA TCGATGGGGC CAGGTCCCGC GCAGCGCGGA TCGCCGAGAT GGTCCGGGCC GGACATAACC CGGCCACTTA CCTGGCGGCG ACGGCCGCCG GCGTCTCAAT CGAGACGCAG CGCCGCGTCG AGGCCGAACG GCCGAAGCCG TCTTGGACCT GGGAGACGTC GGTCGAATCC TTCCTCGCCG ACGTAATGCG CACCAATCGC CCGGACACCC ATCGCGACTA CCGCGGCAAG CTCCGGGTCC CCGAACTCGG CCGGTTCGCC GGCAGGCAGG TCGCCGGAAT CACCCGCAAC GAAATGGCCT CCGCGATCGC CGCAGTCCAC AGCCGCGGCG CTGAGGTCAT GTCCGAGGGA ATGGTCCGCG TCATCAAACG ATTGTGGTCC TGGCTCTCTG AAGCGGTCCG CCAGGACGCG ACGTCGGTGG CCGACGGCGT GATGATCAAG CTCGCGGCTC CTGCCCGCAC AAGATCCGAA ATCGGTGAGG AAGCCTTCGA CCCAGACGCA GAGGCCGGCG ACGCGCCGCC GGAGATCGAG ATCGGCCGCG CACTGGCCCT CGCCCGCCTC GGCTGCCTGC CAGATCGGAT CGGGCTTGGG ATCCAGCTTC TTATCGGGAC TGTCCAGCGC CGGCGGGCGG TCACCGGAGC GAACCGCTGG AGATTTCGCA GCTACGCCGA GGTCAACAGC GAGTGCGCCT GGTACATCCC GCCTTATTTC AGGAAATCAG GGACGAAGCG GGGGACCCGC AGCCATCTCG TCCCGTGCGT CGCCTGGGTC TCCGATGTCG TCGAGCGCCT CGATCGCATG TCTGACTTCG AGGGCAGCGA GGGGTGGCTC TTCCCTGCAG GAGCATCGAA CAAGTCGAAG CGTCAGCACG CCGAGGCCGG GCTGCTAAAC GACTGGATTG GAGCGATGCC AGGCGTCGGC TGGTCGCCGC ACGGCGTCAG GTACGCCTTC GCGTCATACG GCGAGCGCGA CCTCGGATTC GCTCCGAGCG AAGCAAAATT GATCCTCGAT CACATGGAAG GTGTGGAGCC GACCGACGTC ACCGGGCAGT TCTACAGCAG CGACCCGAAG ATTGGCCGGA AGCGATCCAT GATGCGGGCA TGGACGGACT GGTGCGACGA CTGGTGCAAC CGCGCGATCC GCGAAAATCC CGCGCTGCGC GATCGCGATC TGATGTCCGA CGAGATCAGG CGGGTGCGGT ACCGACGTGG CTCCGACGAT GAGGCGGCGT AG
|
Protein sequence | MPDLITAKAL AKAIRDQREG QRYDIIDSRV PGLELRVKPR GVRWSMRCRL HGDRKRYDLG PAVAGDQDIG GLSIDGARSR AARIAEMVRA GHNPATYLAA TAAGVSIETQ RRVEAERPKP SWTWETSVES FLADVMRTNR PDTHRDYRGK LRVPELGRFA GRQVAGITRN EMASAIAAVH SRGAEVMSEG MVRVIKRLWS WLSEAVRQDA TSVADGVMIK LAAPARTRSE IGEEAFDPDA EAGDAPPEIE IGRALALARL GCLPDRIGLG IQLLIGTVQR RRAVTGANRW RFRSYAEVNS ECAWYIPPYF RKSGTKRGTR SHLVPCVAWV SDVVERLDRM SDFEGSEGWL FPAGASNKSK RQHAEAGLLN DWIGAMPGVG WSPHGVRYAF ASYGERDLGF APSEAKLILD HMEGVEPTDV TGQFYSSDPK IGRKRSMMRA WTDWCDDWCN RAIRENPALR DRDLMSDEIR RVRYRRGSDD EAA
|
| |