Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2201 |
Symbol | |
ID | 6409861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2384437 |
End bp | 2385444 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642712085 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001991197 |
Protein GI | 192290592 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGCCC GTGGCGCCGA CGTTCATGCC AACCCGCTCA GTTCTTTTCG CCATGTGAAG ACGGGAAGCA TCGAACTTCT GGAGCACGAG CTTGGTCGTT TTTATCCGGG CATCCGGTTT GAATTGGACA ATCCCGACGG CGCACTCAAT GCGGAGGCCA GTCGATGTGA ATTGAGCGAT ATTGCTCTGA CCTATGGACG GCACGGCACC GGCATCACCA TCGACGTCCC GTACAACAAC ACGCATTCGC TGGTGTTCGC CTACGCCGGC AGCGCTGAAG CCCGCACGGG CCGACTCCGC TCAGACATCG CGGGGCACCG CGCCTTCGTT GCCTCCGCAA CTCGGCCGGT GACGCTCAAA TACGCGCCGG ATTTCGAGCA GCTCATTCTG AACGTTTCAC AGCGGTCGGT CACAACCAAC CTCGAGGCGC TGATCGGCGC CCCGCTCAGT CAACCGATCA TCTTCAAGCC CACTTCGAAT CTTCGGCGCA CGTCGGCGCG CAGGCTGTGG GAGCAGTTGA TGTCTCTCGT CGAGCGGCTG GGCCGACACG ACGGTGGGTA TCATCAGCAA ATCACGACCG AGCTCGAGCA GGCGATCATC CTGTCTTTCC TGACCGCCAA TGAGAGCAAC TACACTCCAT TGCTGATGAG CGAGGCCGCC GCTGCCGGCA GGCGGCCGGT CCATAAGGTG GCGGACTATC TCGAGGCATA CTGGGACCAG CCGCTGACAG TGGAGATGCT GGCGCGGGTG AGCGGAGTGA GCGTACGGAC TCTCTTCCAC AGTTTCCGCG GGCAGTTCGG CTATTCCCCG ATGGAGTTCG TCAGGCGCAT TCGTCTTGAA CGGGCCCGCC AGATGCTGGC CGGCGCCGAT CCGGCGCTTT CGGTGACATC GGTCGCGCTC TCCTGCGGCT TTGGCAATCT TGGTCACTTC GCGGGCTATT ATAAGAAGGC GTTCGGCGAA GCGCCGTCGG CCACGCTGTC GCGCGCCAGG AGCCCTGCAT CGTCCTGA
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Protein sequence | MHARGADVHA NPLSSFRHVK TGSIELLEHE LGRFYPGIRF ELDNPDGALN AEASRCELSD IALTYGRHGT GITIDVPYNN THSLVFAYAG SAEARTGRLR SDIAGHRAFV ASATRPVTLK YAPDFEQLIL NVSQRSVTTN LEALIGAPLS QPIIFKPTSN LRRTSARRLW EQLMSLVERL GRHDGGYHQQ ITTELEQAII LSFLTANESN YTPLLMSEAA AAGRRPVHKV ADYLEAYWDQ PLTVEMLARV SGVSVRTLFH SFRGQFGYSP MEFVRRIRLE RARQMLAGAD PALSVTSVAL SCGFGNLGHF AGYYKKAFGE APSATLSRAR SPASS
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