| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2178 |
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| Symbol | |
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| ID | 6409838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2359195 |
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| End bp | 2360310 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642712062 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991174 |
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| Protein GI | 192290569 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.700364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGA TCGTGGGGTT CCGAAGCGCC ATCATCGCAA TGGCGCTGAT CCTCGGCGGC
TGCGACTCCG CCACTCCGAA GCCCGATCGT GGTGGCAAGG AGCCGACGAA AGCGCAGCCG
GTGATGGTGG TGCCGGTGCG GTTCGAGGAG GGCGCCCGGA CCCGGACCTT TGCCGCCACC
ATCCGCCCCA GCATCGAGAG CGACCTCGGC TTTCGGATCA GCGGCAAGGT GGCGCGGCGG
CTGGTGCGCA TCGGCGATCT GGTGCGCAGC GGCCAGGCGC TGCTGACGCT CGATACCAAT
GATCTCCGGC TGCAGCGCGA GCAGGCCGAA GCCGAGGTCA AAGCGGCGCA ATCCAATCTG
ATCCAGGCCG AGGCCGACGA GGGCCGGGCG GTCGAGCTGC AGAGCAAGGG CTGGATGGCG
AACGCCGCGC TGCAGAAGGC GCACGCTACC GCTGAGGAGG CGCGCAGCCG GCTGATCCGC
GCGCAGCGTG CGCTTGATCT CGCCGGTCAC GCGCTCGGTT ACGCCACCCT CGAAGCCGAC
GCGGACGGCG TGATCACCGC AACCCCGATC GAACCGGGAC AGGTCATCAG CGCCGGACAA
GCCGCGGTCC GTCTGGCGCG GCTGTCGGAA CTGGAGGCGG TGGTCGCGCT GCCGGAGAGT
TACGTCGAGC GCGTCGGCCG AGCCTCCGCT TCCCTCTCGC TGTGGTCGCT GCCCGGCAAG
ACTTACGACG CGCGGCTGCG CGAATTGTCG TTCGCGGCCG ACCTGGCGAC GCGGACCTTC
GCGGCGCGCT TCGTCATCCC CGGCGCGGAC GACAAGGTGC GGATCGGGAT GAGCGCCACG
CTGACGCTGC GCGAGCAGGA CGAGCGGCGC TTCGCACGGC TGCCGCTGAC GGCGGTCTAC
AACCACGGAC GAGGCGCGGC AGTGTTCGTG GTCGGTGACG GCGGCGAATT GCGCGAACGG
CCGGTGACGA TCGAACGTTA CGAGGATCGC AACGTGCTGG TGACCTCCGG CGTGAGCGAC
GGCGAAACCG TGGTCGCGCT CGGTGTCGAA AAGCTTGATC CGGCTGTGAC GGTGCGGCCG
ATCTCCACGC TTTCGCTTAG TTCGGCGGGC AAGTGA
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| Protein sequence | MREIVGFRSA IIAMALILGG CDSATPKPDR GGKEPTKAQP VMVVPVRFEE GARTRTFAAT
IRPSIESDLG FRISGKVARR LVRIGDLVRS GQALLTLDTN DLRLQREQAE AEVKAAQSNL
IQAEADEGRA VELQSKGWMA NAALQKAHAT AEEARSRLIR AQRALDLAGH ALGYATLEAD
ADGVITATPI EPGQVISAGQ AAVRLARLSE LEAVVALPES YVERVGRASA SLSLWSLPGK
TYDARLRELS FAADLATRTF AARFVIPGAD DKVRIGMSAT LTLREQDERR FARLPLTAVY
NHGRGAAVFV VGDGGELRER PVTIERYEDR NVLVTSGVSD GETVVALGVE KLDPAVTVRP
ISTLSLSSAG K
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