Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2174 |
Symbol | |
ID | 6409834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2354312 |
End bp | 2355502 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712058 |
Product | Patatin |
Protein accession | YP_001991170 |
Protein GI | 192290565 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0775647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGCG TGCCTCGTTC CATGGTCGTC GTTTTCGTGC TGGCATCGAG CTGTTGGCTT GCCGCATGCG CGAGCCTGCC GCGCGTGCCG TACACCGCCA CCGAAGCCGC GCAGGCGCGC GTGCTCGATC GCGACGATTT GCGCCGCTAC GCCGACGATC CACCCTCAGC GTTTCGCGTC ACGCGGATTG CCGGTCCGCA GACCTATCTG GCGTTATCCG GTGGTGGCGC CGACGGAGCC TACGGTGCCG GCGTGCTGGC GGGGTGGACC GCAGCCGGGC ACCGGCCCTC ATTCTCGCTC GTATCCGGCG TCAGCACCGG TGCGCTGATC GCGCCATTCG CGTTCCTCGG CTCGCGTTAC GACGACACCT TGCGCGAGCT CTACACCAGC GGCGTCGCCG AAAGCCTGCT CGAGGATCCG AACCCGCTCA ACGCGATCTT CGGCTCGGGG CTGTTCGGCA ACAAGCGGCT GCGCGAACTG GTCGCCCGCT ATATCGATGC CGACTTCATG GCGGAGGTGG CCGAGCAATA CGCCAAGGGG CGGATGCTGT TCGTGGTCAC CACCAATCTG GATTCGCAGC GGTCGGTGAT CTGGGACATG GGCCGGATCG CCTCGTTGCG CACGTCGGAG AGCCTCAATC TGTTCCGGGA TGTCGTCGCT GCTTCTGCAA GCATTCCGGC GGTGTTCCCG CCGATGCTTG TCAATGCCGA GGCCAACGGC GCTCGGTTCC AGGAGATGCA TGTGGATGGC GGCGTGATGT CGCCGGTGCT GACCTTGCCC GAGGCGTATT TGATGCGTAG TGCGTCCTGG GACAAGCCGC TGAACCTGCA ACTCTACATC CTGATGAACA ATACCATCGA ACCGGAGTTC CAGCTCGTGC GCGATCGCGC GCTGGACATC GCTGCACGGT CGTCGTCATC GATGATCAAA GCGCAGACCC GGTCGATTCT CTACAGCACC TACGCGTTCG CACGCCGTAA CAAGTATGGC TTCCACCTGA CCTATATCGA GAGCAATCGG CCGCCGTCGC CGCCCGGCTT CGACACCGCC TACATGCGGT CGCTGTATCA GTACGGTTAC GACCGCGCTC GCAGCGGCAA TGTCTGGTCG AGCGCGCCGC CGGCCAGTGA AACGGTGCCG AGCCCGATTG CGACCACCAC TCCGGCACCG CACGTGGCCG GTGTTCAGTA A
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Protein sequence | MSRVPRSMVV VFVLASSCWL AACASLPRVP YTATEAAQAR VLDRDDLRRY ADDPPSAFRV TRIAGPQTYL ALSGGGADGA YGAGVLAGWT AAGHRPSFSL VSGVSTGALI APFAFLGSRY DDTLRELYTS GVAESLLEDP NPLNAIFGSG LFGNKRLREL VARYIDADFM AEVAEQYAKG RMLFVVTTNL DSQRSVIWDM GRIASLRTSE SLNLFRDVVA ASASIPAVFP PMLVNAEANG ARFQEMHVDG GVMSPVLTLP EAYLMRSASW DKPLNLQLYI LMNNTIEPEF QLVRDRALDI AARSSSSMIK AQTRSILYST YAFARRNKYG FHLTYIESNR PPSPPGFDTA YMRSLYQYGY DRARSGNVWS SAPPASETVP SPIATTTPAP HVAGVQ
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