Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2164 |
Symbol | |
ID | 6409824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2341102 |
End bp | 2343114 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642712048 |
Product | Fusaric acid resistance protein conserved region |
Protein accession | YP_001991160 |
Protein GI | 192290555 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCTGC CCGACGAGCA GCAATGGCTG TTTGCGTTCA AGACGTTCGC CGCTGCGATG CTGGCGATGG CGATTGGGCT GTGGCTCGAT CTGCCGCGGC CGTATTGGGC GGTGGCGACG GTCTACATCA CCTCGCATCC GCTCTCCGGC ACGACGCGGT CGAAGGCGGT GTTCCGCGTC ATCGGCACGC TGATCGGCGC CTGCGTCGCG GTGGCGATCG TGCCCAATCT CGCCGGTGCG CCGCCGCTGC TGGTGCTCGC CATCGCGCTG TGGTCGGCAC TGTGCATCTA CGTCTCGGTG CTCGACCGTT CGCCGCGCAG CTACGTGGCG ATGCTGGCAG GCTACACCAC CGCGCTGATC GGCTTTCCGA CCGTCGATAC GCCGAACCAG ATCTTCGACA TCGCGCTGGC GCGAACCGAG GAGATCGTGC TCGGCATCAC CTGCGCGGCC GTGGTCTCCA GCGTGGTGTT TCCGCGCTCG GTCGGCCCGC TCGCGGCGCA GCGGGTCAAG GCGTGGTTCA AGCACGCCCA TGCCAGCGTT CGCGACGCCG TCAGCCTGAA CAAGAGCCCG GCGGCCGAAA CCCATCGTCT GCAGGTCGCC GCCGACTCCG CCGACATCGA GAACCTCGTC ACCTTCCTCA GCTACGACAC CAATCTCGAC CAGAGCGCGA CGCGTTGGAT CAAGCAATTG CAGCCGCGAA TGCTGCTGCT GTTGCCGGTG ATGTCATCGG TCGCCGATCG CCTCGACGAG CTGCAGCCCC TCGGCGGCCC TTCGGCCCCG GTGGCGGCGT TGGTGGAGCG CACCCGCGTG TGGATGGAAG GCGACGAGCC CGGCGATGGC GCGGTCCGCG ATGCCTTGCT GGCGGACGTT CAGGCCGAGA TCGACCAGCG CCCGCATTGC GGCGCCTGGC GCGACCTCGT CGAGCTCGGC CTCCTGATGC GGCTTCGGGA TCTGCTCAAC ATCCAGTCCG ACTGCATCGC GCTCGCCGCC GCAACCACCG GCAACGCCAC GACGCTCGAT GCGCCGCTGC ACTATCCGAT CGAACAGCAT GTCGCGGTGG TGAAGCATCA GGACCACGGC ATGGCGCTGC TCGCCGCCTT CGTCACGCTG TTCACCGTGA TCACCTGCTG CACCTTCTGG ATCGTGTGCG CCTGGCCGGC CGGTGGCACC GCTGCGATGA TGGCGACGAT CGGTACCAGC CTGTTCGCGG CGCGCGACGA TCCTTATCCG TCGATCGTCG GTCTCACCAA ATGGACCATC GTGGCCGCCT TTGCGGCGGC GGCCTATCTG CTGATGATCC TGCCGGCGGT GCACAATTTC GAGAGTCTGG CGCTGGTACT GGCGCCGGCG TTCATTCTGT ACGGCGTGCT GATGGGCGCG CCCGCGACCT ACCCAATCGG CCTCGGCCTC GCCGTCAACA CCGCCAGTCT GATCGCGCTG CAGGAGATGT ACACGTTCGA CACCGCAAGC TTCCTGAACT CGACTGTGGC CGTGGTCACC GGCACCGGCC TGGCCGCGCT GGTCACTGCC GTACTGCGGC CTGTCGGCGC CGAATGGAGC GCGCTGCGCC TGATCAACGC CAACCGCGCC ACGCTGGCGC AGGCCGCCGA TATCAGCAGC GAGAACCAGC GCGCCAGCGT CGCGGGACTG ATGATCGACC GGATGATGCT GCTGGCGCCG CGCGCCGCCG CCGCCGGCCA CACCATGCCG GAAGCGCTGC GCGAGCTGCG CGCCGGCTTC AACATTCTCG ACCTGCACCG GGCCCGACGT GAGCTGCGGC GCGGCGCTCG TCGCCGGCTG GAACTGCTGC TGATCCGGCT GGAGCGGCAC TACGCTTCAG CTTCATCGGC GCCGCCGGCC GGACTGCTCA GAACGCTCGA CCGCGCCCTC GCCGCGGTTC GCGACGAGCC GAGCGCCACC GCGCGGCGCG CGGTGCTCGG CCTCGTCGGC CTGCGCCGCT GCCTGTTTCC GGCCGCCAAG CCGCCGCAGC TCGCCCCTCA GGAAGCCGCA TGA
|
Protein sequence | MSLPDEQQWL FAFKTFAAAM LAMAIGLWLD LPRPYWAVAT VYITSHPLSG TTRSKAVFRV IGTLIGACVA VAIVPNLAGA PPLLVLAIAL WSALCIYVSV LDRSPRSYVA MLAGYTTALI GFPTVDTPNQ IFDIALARTE EIVLGITCAA VVSSVVFPRS VGPLAAQRVK AWFKHAHASV RDAVSLNKSP AAETHRLQVA ADSADIENLV TFLSYDTNLD QSATRWIKQL QPRMLLLLPV MSSVADRLDE LQPLGGPSAP VAALVERTRV WMEGDEPGDG AVRDALLADV QAEIDQRPHC GAWRDLVELG LLMRLRDLLN IQSDCIALAA ATTGNATTLD APLHYPIEQH VAVVKHQDHG MALLAAFVTL FTVITCCTFW IVCAWPAGGT AAMMATIGTS LFAARDDPYP SIVGLTKWTI VAAFAAAAYL LMILPAVHNF ESLALVLAPA FILYGVLMGA PATYPIGLGL AVNTASLIAL QEMYTFDTAS FLNSTVAVVT GTGLAALVTA VLRPVGAEWS ALRLINANRA TLAQAADISS ENQRASVAGL MIDRMMLLAP RAAAAGHTMP EALRELRAGF NILDLHRARR ELRRGARRRL ELLLIRLERH YASASSAPPA GLLRTLDRAL AAVRDEPSAT ARRAVLGLVG LRRCLFPAAK PPQLAPQEAA
|
| |