Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1978 |
Symbol | |
ID | 6409638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2138916 |
End bp | 2140055 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711864 |
Product | hypothetical protein |
Protein accession | YP_001990976 |
Protein GI | 192290371 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0960116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGCA ATCAGGTTGC TATCGTCGGC GCCGCCGAAA CCACCAAGCT CGGCGTCATC CCCGATATGT CGCAGATCCA GCTCCACGCT GACGCCGCGC TCAACGCGAT CGCCGACGCC GGGCTGAAGC TCTCGGACAT CGACGGCATC GCCACCGCTG TGGAAACGCC GCAGCAGATC GCCCACTATC TCGGGATCAC CCCGACCTGG GTCGACGGCA CGTCGGTCGG CGGCTGCTCG TTCATGCTGC ACGTCCGCCA CGCCGCCGCG GCGATCGAGG CCGGGCTGTG CAAGACCGTG CTGATCACCC ATGCCGAGAG CGGCAAGTCG ATGATCGGCA AGCTGCCACG CTCGATTCCC GCCGACAGCC TGCAGGGCCA GTTCGAGGCG CCCTACGGCA TCTACGGGCC GCCGAGCCAG TTTCCGATTC CGGTGCTGCG CTTCATGAAG ACCTACGGCA TCCCCCACGA GCAGATCGCC TCGGTGGCCG TGGTGCAGCG AGAATGGGCC GCGAAGAATC CGCGCGCGAT GATGAAGGAC CCGATCACCG TCGAGGACGT GCTGAACTCG CGGATGATCG CCTACCCGTT CCGGCTGCTG CAGTGCTGCC TCGTCACCGA CGGCGGCGGC GCACTGATCA TGACCTCGGC CGATCGCGCC AAGGACTTCC CGCACAAACC GGTCTATGTG CTCGGCACCG GCGAGAGCGT GGAAACGCCG ATGGTCAGCC AGATGGAGAC CTTCAACTCC TCGCGCGCCT TCAAGGTGGC GGGCCCGACC GCGTTCCGCG AAGCTGGTAT CAGCCACAGC GACGTCGATC ATCTGATGAT CTACGACGCC TTTGCGCACC TGCCGCTGTT CGGCCTCGGC GACCTCGGCT TCATGCCCTA TGAGGAAACC GGAAAGTTCA TCGCCGACGG CAACACCCGC CCCGGCGGCA AGCTGCCGCT CAACACCAAC GGCGGCGGCC TGTCCTACAT GCACTCGGGC ATGTACGGCA TGTACGCGTT GCAGGAAAGC GTCCGGCAGA TGCGCGGCAT CGCGCCCGCA CAGGTGCCGA ACGCGAAGAT CTCGGTCTGC CACGGCGTCG GCGGCATGTT CGCTGCAAGC GGCACGATCA TCTTCACCAA CGAGAAGTAG
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Protein sequence | MRRNQVAIVG AAETTKLGVI PDMSQIQLHA DAALNAIADA GLKLSDIDGI ATAVETPQQI AHYLGITPTW VDGTSVGGCS FMLHVRHAAA AIEAGLCKTV LITHAESGKS MIGKLPRSIP ADSLQGQFEA PYGIYGPPSQ FPIPVLRFMK TYGIPHEQIA SVAVVQREWA AKNPRAMMKD PITVEDVLNS RMIAYPFRLL QCCLVTDGGG ALIMTSADRA KDFPHKPVYV LGTGESVETP MVSQMETFNS SRAFKVAGPT AFREAGISHS DVDHLMIYDA FAHLPLFGLG DLGFMPYEET GKFIADGNTR PGGKLPLNTN GGGLSYMHSG MYGMYALQES VRQMRGIAPA QVPNAKISVC HGVGGMFAAS GTIIFTNEK
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