Gene Rpal_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1740 
Symbol 
ID6409397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1865464 
End bp1866561 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID642711628 
Productmagnesium-protoporphyrin IX monomethyl ester cyclase 
Protein accessionYP_001990743 
Protein GI192290138 
COG category 
COG ID 
TIGRFAM ID[TIGR02029] magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAA TGGAGGGTGG CGCCCAAGGC GCACTCCGAA CGCGACCAGA CATCAAGGGT 
AGCGTCGACA GCCTCAACAT CGCCAAGCAA GACACCATCC TGACGCCGCG GTTCTACACC 
ACCGATTACG CGGCGATGGA CAAGCTCGAT GTCAGCCTGG TGCGGGCCGA ATGGACCGCG 
ATGATGAACG AGCTGCGTGC CGACTATAAC AAGTCGCACT TCAAGAAGAC CGACGAGTTT 
CTGAACAGCG ACCTCGACAA GCTGCCGCCG GAGCTGCGCG CCGAGTTCAA GGACTTCCTG 
GTGTCGTCGC TGACGGCCGA GTTCTCCGGC TGCGTGCTCT ATGCCGAGAT CAAGAAGCGG 
ATCAAGAACC CGGAGATCCG CGAACTGTTC GGCCTGCTGA GCCGCGACGA AGCCCGCCAT 
GCCGGCTTCA TCAACGAGAT CCTCAAGGAT CACGGCATCG GCGTCGACCT TTCGTTCCTG 
ACCAAGGTCA AGAAGTACAC CTACTTCCGG CCGAAGTTCA TCTTCTACGC GACCTATCTG 
TCGGAGAAGA TCGGCTACGC CCGCTACATC ACGATCTATC GCCAGATGGA GCGCCACCCG 
GAACGCCGCT TCCACCCGAT CTTCAAGTGG TTCGAGCGTT GGTGCAACGA CGAGTTCCGG 
CACGGCGAGG CGTTCGCGTT GCTGATGCGC GCCGATCCGT CGCTGCTGTC CGGTGTCAAC 
AAGCTGTGGA TCCGGTTCTT CCTGCTCGCG GTGTTCTCCA CGATGTACGT CCGCGACCAC 
ATGCGCCCGG CGTTCTATGA GGCCCTCGGC GTCGATGCCA CCGACTACGG CATGCAGGTG 
TTCCGCATCA CCACCGAGAT CTCCAAGCAG GTCTTCCCGG TGACGATCAA CCTCGACGAT 
CCGCGCTTCC TGCAGAACCT CGAGCGGCTG CGCATCGCCG CGGAGAAGAT CGACCGCAGC 
CACAGCCAGG GTCTGCTCGG CAAGTTGAAG CGGCCGTTCT ACGCCGCCTC GGCGGCGCTG 
GCTTTCGGCC GGCTGTTCCT GCTGCCGGCC AAGCGCAACG AACTGCCGCG CGTGATCGGC 
CTGCGTCCGG CGTGGTGA
 
Protein sequence
MIPMEGGAQG ALRTRPDIKG SVDSLNIAKQ DTILTPRFYT TDYAAMDKLD VSLVRAEWTA 
MMNELRADYN KSHFKKTDEF LNSDLDKLPP ELRAEFKDFL VSSLTAEFSG CVLYAEIKKR 
IKNPEIRELF GLLSRDEARH AGFINEILKD HGIGVDLSFL TKVKKYTYFR PKFIFYATYL 
SEKIGYARYI TIYRQMERHP ERRFHPIFKW FERWCNDEFR HGEAFALLMR ADPSLLSGVN 
KLWIRFFLLA VFSTMYVRDH MRPAFYEALG VDATDYGMQV FRITTEISKQ VFPVTINLDD 
PRFLQNLERL RIAAEKIDRS HSQGLLGKLK RPFYAASAAL AFGRLFLLPA KRNELPRVIG 
LRPAW