| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1602 |
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| Symbol | |
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| ID | 6409259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1713413 |
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| End bp | 1714423 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711491 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990606 |
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| Protein GI | 192290001 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.47347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGCA AGGGCTTCTA TCAGACCCTG GCGTCGCCAT GGCTGTGGGG CATTCTGGTT
CTCGCGGCCT GCCTGCCGCT GGCGCTGAAC AGCTACCATC TCCACCTTCT GACCCTGGCG
CTGGTCTATG TGGCGCTGGC GTCGGCGTGG AACATCGTCG GCGGCATGGC CGGCCAGGTG
TCGCTGGCGC ACAGCCTGTT CATCGGCATC GGCGCGATGC TGTCGACCGC GCTGCTGGTC
AAGTTCGGCA TCAACATGTG GGCCGGGCTT GTGATCTCCG CGGCGATCGC AGGCGCGCTC
GGCGCGATGA TTGCCTGGAT CGACTTCCGG TTTCAGCTCG GCCATTTGTC GTTCGTGCTG
ATCACGCTGG CGTTCGCCGA GATGGGCGCA ATCATCGTCG AAGGCTGGGA GTTCCTCGGC
GGCGCCTCCG GCCTGCTGCT GCCGCGTGAC ACTGGTGACT TCTGGGCGTT CCAATTTGGC
GGCGGACGCG GTGCGTTCTG GGTGATGCTC GGGCTGGCGG CTGCCGTGGT GCTGGTCAAC
GTCGCGATCC TGAATGCGCC GCTCGGCTAT TATCTTCGCA CCATCCGCGA CAACGAGAAG
GCCGCGCAGG CGATAGGCGT GAATGTGCTG CGCCACAAGA TCACCGCGAT GACGATCTCG
GCGGTGCTGA CCTCGATCGT CGGCACCTGC TATGTGCGCT ATCTGACGTT TGCCGATCCG
TATCTGCTGG CGACCCCGAC CATCACCATC GAGATTGTGC TGTTCGCCAC CGTCGGCGGC
CTCGGCCGCG CGTTCGGTCC GGCGCTCGGC GCGCTGCTGC TGGTGCCGCT CGGCGAGGTG
CTGCGCGGCC AGCTCGGCGG TGCGGTGCCG GGGCTGCACT ACTTCATCTA CGGCGTGGTC
GTGATCGTGG TGATCCTCGT CACGCCGCGC GGCCTGCTGC CGCTAGCCGA ACGGGCGTGG
CGCAGCTTGC GCCGCCGCGG CCCGGAGCCG CGGCCGGCTT CAGCGTCGTA A
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| Protein sequence | MISKGFYQTL ASPWLWGILV LAACLPLALN SYHLHLLTLA LVYVALASAW NIVGGMAGQV
SLAHSLFIGI GAMLSTALLV KFGINMWAGL VISAAIAGAL GAMIAWIDFR FQLGHLSFVL
ITLAFAEMGA IIVEGWEFLG GASGLLLPRD TGDFWAFQFG GGRGAFWVML GLAAAVVLVN
VAILNAPLGY YLRTIRDNEK AAQAIGVNVL RHKITAMTIS AVLTSIVGTC YVRYLTFADP
YLLATPTITI EIVLFATVGG LGRAFGPALG ALLLVPLGEV LRGQLGGAVP GLHYFIYGVV
VIVVILVTPR GLLPLAERAW RSLRRRGPEP RPASAS
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