| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1553 |
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| Symbol | |
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| ID | 6409210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1645543 |
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| End bp | 1647183 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711447 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001990562 |
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| Protein GI | 192289957 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA CGGGCGACCT CGAAAGCTGG ACGGTCAACG ACGCGCTGAT CCGCCGGGCG
ATGCGCGATC CCGACCGGCC GTTGCTGCGG TTCGTCGGCG GACGCGCCGA GAGCTGCGGC
GAGACCTACG CGTCGGCGAC GCGGCTGGCG GCCGGACTGC AAGCGCTCGG AGTCGGGCCG
GGCGATCGCG TCATCGCGAT GATGCACAAT CGGATCGAGG CGATCCATCT GTGGCTGGCG
ACCAATCTGG TCGGCGCGGT CGACGTTGCC ATCAACGCCG GCTATCGCGG CGCGCCGCTG
GTCCACGCCA TCGAGCAGAC CGGACCGAAG GTGATCGTGA TCGAGGCCGG GCTCGTGCCG
GCGCTGGCTG CCGTCGCGGC CGAGCTCCGG GCGCCGGCGA TCGTCGTCGT GATCGACGAG
GCGCCCCGGA ACGATCTGCC GCTGGCGTTC AGGACGACGT CGTTCGCCTC GCTGTGCGAA
GGCGCGGCCC TGGATGCGCC CGCCGCGCTG CGGCGCTCGG ACACCGCCTC GATCATCTTC
ACCTCCGGGA CCACCGGGCC TGCCAAGGGC GTGGTGATGC CGCACGGGCA GGTGATGCTG
ATCGCGCATC GCACCGCGCA TCATTGCCGG CTGTCACAGC AGTCGGTCTG GTACAGCTTT
CACCCGCTGT ATCACATGGC CGGAAAATTC ATGGCTGTGC TCGGATCGCT GGTCGCAGGC
GGCGAAGTGG TGATCGACAC CGCGTTCGAG CCGGCCGCGT GGATTTCGCG CGCGCGCCAT
TTCGGTGCGA CGATTTCCGG CGGTCACGGG CCGATGCTGG AGATGATCTT CGCGACGCCG
CCGCGCGACG ACGATCGCAA CCACAGTCTC GAGACCGTCT GCTCAGCGCC GTTCCCGCAC
CACATCGCGC GTGATTTTGA AGCGCGGTTC GGCGTCAGAG GTCTTGAGGT ATGGGGCATG
ACCGAGGTCG GTCTGCCGCT GTGGAACGAC ATCGCGGCAC CGCTGCGCGA AGGGTCCTGC
GGGCGTCTCG ATGCTGAATG GTTCGAGTTC GCGGTGGTCG ATCCGGAGAG CGACACGCCG
GTCGCGCTCG GTGTCGTCGG CGAGTTCGTG GTGCGGCCGA AGGCGCCGTG GACGATCATG
CAGGGCTACG ACGCCATGCC GGACAAGACC GTCGAGGCGT GGCGCAATCT TTGGTTCCAT
ACCGGCGATC TCGGCCATCT CGACCGCGAC GGCTACGTGT ACTTCGCCGA GCGCGCTTCC
GAGCGGATCC GCCGCCGTGC CGAGAACGTC TCGGCGCACG ACATCGAGAT CGCGATCAGC
CGGCATCCCG CAGTGCGCGA GGCCGCGGCG ATCGGCGTGC CCTCGGAGTT CGCCGGCGAC
GACGACATCG AGCTCTGCCT GGTGCTGAGC CCGGGCAGCG AGGTCGTGCC GCACGATCTC
CTCGCCTATC TCGCCAGTGC TCTGCCGCAC TACATAGTGC CACGCTATCT GCGCTTCATG
GACGAACTGC CGCGCAGCGT CACCAACAAG ATTCAACGCA CCCATTTGAA ACAATCGAGC
GGCGGCGCGC AGCGCTGGGA CCGCAAGGCC CACGGCATCG TGCTGCGCGA TCTGATCGGC
CGGGAGAACG GACATGACTG A
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| Protein sequence | MTQTGDLESW TVNDALIRRA MRDPDRPLLR FVGGRAESCG ETYASATRLA AGLQALGVGP
GDRVIAMMHN RIEAIHLWLA TNLVGAVDVA INAGYRGAPL VHAIEQTGPK VIVIEAGLVP
ALAAVAAELR APAIVVVIDE APRNDLPLAF RTTSFASLCE GAALDAPAAL RRSDTASIIF
TSGTTGPAKG VVMPHGQVML IAHRTAHHCR LSQQSVWYSF HPLYHMAGKF MAVLGSLVAG
GEVVIDTAFE PAAWISRARH FGATISGGHG PMLEMIFATP PRDDDRNHSL ETVCSAPFPH
HIARDFEARF GVRGLEVWGM TEVGLPLWND IAAPLREGSC GRLDAEWFEF AVVDPESDTP
VALGVVGEFV VRPKAPWTIM QGYDAMPDKT VEAWRNLWFH TGDLGHLDRD GYVYFAERAS
ERIRRRAENV SAHDIEIAIS RHPAVREAAA IGVPSEFAGD DDIELCLVLS PGSEVVPHDL
LAYLASALPH YIVPRYLRFM DELPRSVTNK IQRTHLKQSS GGAQRWDRKA HGIVLRDLIG
RENGHD
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