Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1545 |
Symbol | fumC |
ID | 6409202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1635331 |
End bp | 1636788 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711439 |
Product | fumarate hydratase |
Protein accession | YP_001990554 |
Protein GI | 192289949 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCG AGACTGTGAC ACCGACCCTG CGTGACGTGC CGATCGGCTT CGCGGCAAAG GGCGAGCGCC GCGAATTTGA CAGCATGGGT AGCGTCGACG TTCCGGCCGA TCGTTATTGG GGCGCGCAGA CGCAGCGCTC GTTGCAGCAT TTCTCGATCG GCGGCGACCG GATGCCGAAG GCCGTGTACC ACGCCTATGG CTACGTCAAG AAAGCCTGCG CGCTGGTGAA TCACGCGGCG GGGAGGCTGC CGGCGTGGAA GACCGACGCC ATCGTTCGCG CCGCCGACGA GACGATCTCG GGCGCGCTGG ACGATCACTA CCCGCTTTTC GTGTGGCAGA CCGGCTCCGG CACCCAGAGC AACATGAACG TCAACGAAGT CGTCTCCAAC CGGGCGATTC AGTTGCTTGG CGGCGGACTC GGCACCCAGC AGCCGGTCGG ACCCAACGAC GACGTCAATA TGGGCCAGTC CTCCAACGAC ACCTTCCCGA CCGCGATGCA TATCGCCGCG GTGACGGCGA TCGACGACCA GGTCGTGCCG CAGCTCTCCA AGCTGATCGA GATCATTGAA CGCAAGGCCG ACGGCTGGAT GGACGTCGTC AAGATCGGTC GCACCCATCT GGAAGACGCC GTGCCGCTCA CGGTCGGTCA GGAATGGCAC GGCTGGGCTG GCCAGTTGCG CGATGCTCGC GATGCGATCG AAGCCAGCCG GGTCGGTCTG TATCAGCTCG CGGTCGGCGG CACTGCGGTC GGCACCGGCC TCAACGCGCC GAAAGGCTTT GCTGTGGACG TGGCCGCCAA GATTGCTGAA CTCACCGGCA AGCCGTTCGT GACCGCGCCG AACAAGTTCG CCGCCCAGGG CTCGCTCGAC GCGATGGTCC GCGCCCACGG CGCGCTACGC GATCTCGCGG TGGCGCTGAT GAAGATCGCC AACGACATGC GCTGGCTCGC TTCTGGTCCG CGTTGCGGCT TCGGCGAGTT GCTGCTGCCG AGCAACGAGC CCGGCTCCTC GATCATGCCC GGCAAGGTCA ACCCGACCCA GTGCGAAGCC ATGGTGATGA TCTGCATTCA GGTGATGGGC AACGACAGCG CCGTCGCCTT CGCGGGCAGC CAGGGCAATT TCGAACTCAA CGCGATGCGC CCGGTGATCA TCAACAACTT CCTGCATTCG GCGCGGATCC TCGCCGACGG TTGCGAGAAA TTCCGCACCT ATTCGGTCGA AGGCACCGAC CTCAATCGCG ACCGCATCGC CCAATATGTT GAAGGCAGCG TGATGCTGGT CACCGCGCTG TCGCCGGTGA TCGGCTATCA GAACGCCGCC CATATCGCCG AGGATGCGAT CGCCAAGGAT CTGACGCTGA AACAGGCGGC GCTCGCCTCC GGCAAGGTCG ACGAGGTGAT GTTCGACCGC ATCGTCCGGC CGATCGACAT GGTCGGCAGC GGCCTCGCGG GCGCTTGA
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Protein sequence | MASETVTPTL RDVPIGFAAK GERREFDSMG SVDVPADRYW GAQTQRSLQH FSIGGDRMPK AVYHAYGYVK KACALVNHAA GRLPAWKTDA IVRAADETIS GALDDHYPLF VWQTGSGTQS NMNVNEVVSN RAIQLLGGGL GTQQPVGPND DVNMGQSSND TFPTAMHIAA VTAIDDQVVP QLSKLIEIIE RKADGWMDVV KIGRTHLEDA VPLTVGQEWH GWAGQLRDAR DAIEASRVGL YQLAVGGTAV GTGLNAPKGF AVDVAAKIAE LTGKPFVTAP NKFAAQGSLD AMVRAHGALR DLAVALMKIA NDMRWLASGP RCGFGELLLP SNEPGSSIMP GKVNPTQCEA MVMICIQVMG NDSAVAFAGS QGNFELNAMR PVIINNFLHS ARILADGCEK FRTYSVEGTD LNRDRIAQYV EGSVMLVTAL SPVIGYQNAA HIAEDAIAKD LTLKQAALAS GKVDEVMFDR IVRPIDMVGS GLAGA
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