| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1543 |
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| Symbol | |
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| ID | 6409200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1628986 |
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| End bp | 1629888 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642711437 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990552 |
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| Protein GI | 192289947 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC TGGAGGCGTT CGGGGATCGA AAGTTTCCAG CCGCCGAGCT TATTCTAAGC
TCCGAAGGAC GAGGCTGGGA CGGCCTCGGC ACCCAGGTTC GGCGCCATCC CGCCGGCGAG
ATCCCGGTGC CGATTCCCGA CCAGATGGAG GTCACCCTCG CAATCGCCGG CTCACAGACT
GGGCGCGTGG AGCGTCGCTC CGGTAGCGCG TTTCAGAATA CGACGGCGCG ACCGGGCACG
CTGTGGTTCT GTCCCATTGG CGTCACCGAG GATTCGATCC GGATCACCGA AACGCTGCCT
GTGGTGCAGC ACGTCTTCCT TGCAAAGTCG CAGTTCGACA GTCTTTCCGA GCTGAGTTCG
AGATCGCTGT CGCCTGCGAG CATCGCCTAT CTAGCGGACG TCAACGACGA GTTGGTCCGC
CAGATCTGCC AGCGGATCTA TCGGGAGGCG CAGGAAGAAA CCAGCAGCGG CAAGATCCTG
ATCGACTGCC TCGCCCAGTC CCTGGTGGCG CATCTCGTTT CCGACTATTC CCACGACAGC
CGTATCCACC TCAGCCCCGA CAGCGGACCA TCGAAGCTCG ACGACGCGAG GCTGCGCCGG
GTGCTGGACT ACATTTACGA CAACATCGAC CAGGATCTGT CTCTGTCGAA GCTGTCGGAC
GTCGCCTGCC TCAGCAAACA TCATTTCGCA CGGGCGTTCC GGGAAGCGAC GGGAACGCCG
CCCTACCGCT TCATCAGTGA GCGAAGACTT GATCACGCGC TGAACCTGCT CAAAGACGGC
CAACTGAGCT TGGCGGAAAT CGCCTACATC TGCCGGTTCT CCTCACAGGC AACTTTCACC
CGGGCGTTTC GGCGCCATGT CGGCACCTCG CCAGGTGAAT ATCGACATCT GTCCCGCACC
TGA
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| Protein sequence | MTKLEAFGDR KFPAAELILS SEGRGWDGLG TQVRRHPAGE IPVPIPDQME VTLAIAGSQT
GRVERRSGSA FQNTTARPGT LWFCPIGVTE DSIRITETLP VVQHVFLAKS QFDSLSELSS
RSLSPASIAY LADVNDELVR QICQRIYREA QEETSSGKIL IDCLAQSLVA HLVSDYSHDS
RIHLSPDSGP SKLDDARLRR VLDYIYDNID QDLSLSKLSD VACLSKHHFA RAFREATGTP
PYRFISERRL DHALNLLKDG QLSLAEIAYI CRFSSQATFT RAFRRHVGTS PGEYRHLSRT
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