Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1426 |
Symbol | |
ID | 6409083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1505672 |
End bp | 1506421 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711325 |
Product | ABC transporter related |
Protein accession | YP_001990441 |
Protein GI | 192289836 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.959016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCC AGCCGATCTT ACGGCTCGCC AATATTGAAA GCTGCTACGG CCCGATCACC GCGATCCGGG GCATCACCCT CGATTTGATG CGTGGCCAGA TCGTCACCGT GCTCGGTGCC AACGGTGCCG GCAAGACCAG CATCCTGAAG ACGATCTCCG GCGTTCTCGA TCCGCTGAAA GGCACGGTCG AATTCGAAGG CCGCAAGATC CAGTCGATGG AGCCGGACAA GGTGGTGCGG CTCGGCATCA GCCACGTGCC GGAGGGGCGC GAGATCTTCC CGTTCCTCAG CGTCCGCGAC AATCTCAAGA TGGGCGCCTA CATCCGCACC GATCAGCACG AGGTCGCCGC CGACATCGAG AAGGCATTCA ATTACTTCCC GGTGCTGCGC GAGCGTCAGG ATCAACTGGC CGGTCAGCTC TCCGGTGGCC AGCAGCAGAT GCTGGCGATC AGCCGCGCGC TGATGGCGCG GCCTAAGGTG CTGCTGCTCG ACGAACCGTC GCTCGGCCTG TCGCCGCTCT TAGTGAAGGA GATCTTCGCG ATCATCCGGC GACTCAATGC CGAGGAGGGC GTCTCGATCC TGCTGGTCGA GCAGAACGCG CGGATGGCGC TGGAGACCGC ACACTATGGG TATGTGCTCG AGGTTGGCCG GGTGGTGAAG CACGACACCT GCGCCAACTT GATGCAATCG GATCAGATCC GGGAATTTTA TCTCGGCCAC GGACAGGGCG GACATGGCAA GCGGCACTGA
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Protein sequence | MSAQPILRLA NIESCYGPIT AIRGITLDLM RGQIVTVLGA NGAGKTSILK TISGVLDPLK GTVEFEGRKI QSMEPDKVVR LGISHVPEGR EIFPFLSVRD NLKMGAYIRT DQHEVAADIE KAFNYFPVLR ERQDQLAGQL SGGQQQMLAI SRALMARPKV LLLDEPSLGL SPLLVKEIFA IIRRLNAEEG VSILLVEQNA RMALETAHYG YVLEVGRVVK HDTCANLMQS DQIREFYLGH GQGGHGKRH
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