| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1342 |
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| Symbol | |
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| ID | 6408999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1414611 |
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| End bp | 1415366 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711241 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001990357 |
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| Protein GI | 192289752 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.306242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAT ACGACTTCCG CAGCCCCCGC CTTTTCGTCG ATGCCGCCCT CGCGCCCGGT
GCGCAGGTGC CGCTCGAGCG CGACCAGAGC AATTATCTCG GCAATGTGCT GCGGCTCGGT
GCCGGCGCCG CCGTGCTGGC CTTCAATGGT CGTGACGGCG AGTGGCGCGC CACCATCGCG
GGCCGCAAGC GGCCCGAGGC GCTGGAGGTG GCGGAGCAGA CGCGGCCGCA GGACCGCCTC
CCCGACGTCG CCTATGTGTT CGCCCCGCTG AAGCACGCCA GGCTCGACTA TATGGCTCAA
AAGGCTGTGG AAATGGGCGC CGGCCGGCTG CAGCCGGTGC TCACCCAGCA CACCCAGGTG
CACCGGCTGA ACACCGACCG GATGCGCGCC AATGTGATCG AGGCCGCCGA GCAATGCGGC
ATCCTCAGCC TCGCCGAGGT TGGCGAGCCG ATCGGGCTGG ACCGGTTCCT GGCCAGCCGG
GCAAACGGAG AGCGGCTGCT GGTGTTCTGC GACGAGGACG CGGAGATCGC CGATCCGGTC
GCCGCGCTCC AGGCCGCCCG GGATGCGGCG GCCAGGGGCG TCGACCTGCT GGTCGGGCCC
GAGGGCGGGT TTTCCACCGA AGAGCGCGCT TTGCTGCTGA AACAGCCCGT CATCCTGCGG
CTAGCACTGG GCCCGCGGAT TATGCGGGCC GACACTGCAG CGGTCGCCGC CCTGACTCTG
GTTCAGGCGG TGTTGGGCGA CTGGAAGGGT AATTAG
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| Protein sequence | MSRYDFRSPR LFVDAALAPG AQVPLERDQS NYLGNVLRLG AGAAVLAFNG RDGEWRATIA
GRKRPEALEV AEQTRPQDRL PDVAYVFAPL KHARLDYMAQ KAVEMGAGRL QPVLTQHTQV
HRLNTDRMRA NVIEAAEQCG ILSLAEVGEP IGLDRFLASR ANGERLLVFC DEDAEIADPV
AALQAARDAA ARGVDLLVGP EGGFSTEERA LLLKQPVILR LALGPRIMRA DTAAVAALTL
VQAVLGDWKG N
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