| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1243 |
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| Symbol | |
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| ID | 6408899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1315822 |
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| End bp | 1318848 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711141 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_001990258 |
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| Protein GI | 192289653 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.147506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG CCGCTTCGAA GAAGAAGACC GCCCCGAAAT CCAAGTCTTC CAAGACTGCG
CGTGGAAAGG GCGCTGCCGC GTCGAGTGCG CGCAAGGCAG TGGCGAAGAG CCCGCCGAAG
CCGGCCAAGA AGGCTGTTAG CAAGCCGGCC GCCAAGCCCG CTGCCAAGCC CGCCGCGAAG
TCGAAAGCGG TGACCAAGCC CGCCACCAAG ACGGTGACCA AGGCTGCGGC CAAGCCTGCA
ACCAAGGCCG CCACGAAGCC CGCGACCAAG CCGGCCGCGA AGGCGGTGGC CAAGTCCGCT
GCAAAGCCCG CCAAGAAGCC CACCGCCAAC GCGGTTGCCG CGCCGAAGGC CGGCAAGTGG
GTCTACACCT TCGGTGACGG CAAAGCCGAA GGCCGCGCCA ACATGCGCGA CCTGCTCGGC
GGCAAGGGCG CCAACCTCGC CGAGATGGCC AATCTCGGCC TGCCGGTGCC TCCGGGCTTC
ACCATTCCGA CCTCGGTCTG CACCTACTTC TACGCCAACG GCAAAACCTA TCCGAAGGAG
CTGCAGTCGC AGGTCGAGCG CGCGCTCGAT CACGTCGGCA AGCTCACCAA CAAGAAGTTC
GGCGATGCCA AGAACCCGCT GTTGGTGTCG GTGCGCTCCG GCGCCCGCGC CTCGATGCCG
GGCATGATGG ACACCGTGCT CAACCTCGGC CTCAACGACC AGACGGTCGA AGCACTGGCC
GAGAAGTCGG GCGACCGCCG CTTCGCCTAT GACAGCTATC GCCGTTTCAT CACGATGTAC
TCGGACGTGG TGCTCGGCTT CGAGCACCAT CATTTCGAGG AAATCCTCGA CGCCTATAAG
GACGCCAAGG GCTTCACACT CGACACCGAT CTCGATGCCG ACGACTGGGT CGATCTGGTC
GGCCAGTACA AGGAAGCCGT GGCGCGCGAG ACCGGCGAGG ACTTCCCGCA GGATCCGCAC
GCCCAGCTGT GGGGCGCGAT CGGCGCGGTG TTCTCGTCGT GGATGAATGC CCGCGCGGTG
ACCTACCGCC GCCTGCACGA CATTCCGGAA TCCTGGGGCA CCGCCGTCAA CGTCCAGGCG
ATGGTGTTCG GCAACATGGG TGAGACCTCG GCGACCGGCG TTGCCTTCAC CCGCAACCCG
TCGACCGGCG AAAGCCGTCT GTACGGCGAA TTCCTGATCA ATGCGCAGGG TGAGGACGTC
GTCGCCGGCA TCCGCACCCC GCAGGACATC ACCGAGCACG CCCGCATCGA ATCCGGCTCC
GACAAGCCGT CGATGGAAAT GGCGATGCCG GAGGCGTTCA AGGAACTGAC CCGGATCTAC
ACCCTGCTCG AGAAGCACTA TCGTGACATG CAGGACATGG AGTTCACGAT CGAGCAGGGC
AAGCTGTGGA TGCTGCAGAC CCGCGGCGGC AAGCGCACCG CCAAGGCGGC GCTACGGATC
GCGGTCGAGC TCGCCAACGA AGGCCTGATC AATCGCAAGG ACGCCGTGAC CCGGATCGAG
CCGGGCTCGC TCGACCAGCT GCTGCATCCG ACCATCGACC CGAACGCCAA GCGCGACGTG
ATCGCCACCG GCCTGCCGGC ATCGCCCGGC GCCGCCTCCG GCGAGATCGT GTTCTCGTCG
GATGAGGCCG CCAAGCTGCA CGCCGATGGC CGCAAGGTCG TGCTGGTGCG CATCGAGACC
AGCCCCGAAG ACATCCACGG CATGCATGCC TCGGAAGGCA TCCTCACCAC CCGCGGCGGC
ATGACTTCGC ACGCCGCGGT GGTGGCGCGC GGCATGGGCA AGCCCTGCGT CTCCGGCTGC
GGCGCGATCC GCGTCGATTA CGGCCGCGGC ACCATGATGA TCGGCAACCG CACCTTCAAG
GCGGGCGACA TCATCACCAT CGACGGCGGT ACCGGCCAGG TGCTGGCCGG CAAGATGCCG
ATGATCGAGC CGGAACTGTC GGGTGACTTC AACACGCTGA TGGGCTGGGC CGACGAAGTC
CGCAAGCTCA AGGTCCGCGT CAATGCCGAC ACCCCGGCGG ACGCCCGCAC CGCGATCAAG
TTCGGCGCCG AAGGCATCGG CCTGTGCCGC ACCGAGCACA TGTTCTTCGA AGAGACCCGC
ATCCGCACCG TGCGCGAGAT GATCCTGGCC GAAGACGAGC AGTCGCGTCG CTCCGCGCTC
GCCAAGCTGC TGCCGATGCA GCGCGCCGAC TTCGTCGAGC TGTTCGAGAT CATGAAGGGC
TTGCCGGTGA CGGTGCGCCT GCTCGATCCG CCGCTGCACG AGTTCCTGCC GCACACCCAG
GCGGAGATCG AGGAAGTGGC GCGGGCGATG AACGCCGATC CGCGCCGGCT CGCCGATCGC
GCCCGCGAGC TCGCCGAGTT CAACCCGATG CTCGGCTTCC GCGGCTGCCG TCTGGCGATC
GCCTATCCGG AGATCGCCGA GATGCAGGCC CGCGCGATCT TCGAGGCCGC GGTCGAGGCC
GAGAAGCGCA CCGGCGAGCA GGTCGGCCTC GAAGTGATGG TGCCGCTGAT CGCGACCCGC
GCCGAGTTCG AGCTGGTGAA GGCCCGGATC GATGCCACCG CGCAGGCGGT GAACCGCGAT
ACCGGCAGCA ATCTGAAGTA CCAGGTCGGC ACCATGATCG AGCTGCCGCG CGCCTGCCTG
ATGGCCGGTG ACATCGCCGA AAGCGCCGAG TTCTTCTCGT TCGGCACCAA CGACCTGACC
CAGACGACGT TCGGCATCAG CCGCGACGAC GCTGCCAGCT TCCTCGGCAC CTATATCGAA
AAGGGCATCT TCACGGTCGA TCCGTTCGTG TCGGTGGACC GCGACGGCGT CGGCGAGCTG
GTCCGGATCG GCGTCGAGCG CGGCCGCAAG ACTCGCGCCA AGCTCAAGGT CGGCATCTGC
GGCGAACACG GCGGCGACCC GGCGTCGGTG GCGTTCTGCC ACGAGGTCGG CCTCGACTAC
GTGTCGTGCT CGCCGTATCG CGTGCCGATC GCGCGGCTCG CCGCGGCGCA GGCCGCGCTC
GGCAAGGGCA TCGCCAGCCA GGCGTAA
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| Protein sequence | MAKAASKKKT APKSKSSKTA RGKGAAASSA RKAVAKSPPK PAKKAVSKPA AKPAAKPAAK
SKAVTKPATK TVTKAAAKPA TKAATKPATK PAAKAVAKSA AKPAKKPTAN AVAAPKAGKW
VYTFGDGKAE GRANMRDLLG GKGANLAEMA NLGLPVPPGF TIPTSVCTYF YANGKTYPKE
LQSQVERALD HVGKLTNKKF GDAKNPLLVS VRSGARASMP GMMDTVLNLG LNDQTVEALA
EKSGDRRFAY DSYRRFITMY SDVVLGFEHH HFEEILDAYK DAKGFTLDTD LDADDWVDLV
GQYKEAVARE TGEDFPQDPH AQLWGAIGAV FSSWMNARAV TYRRLHDIPE SWGTAVNVQA
MVFGNMGETS ATGVAFTRNP STGESRLYGE FLINAQGEDV VAGIRTPQDI TEHARIESGS
DKPSMEMAMP EAFKELTRIY TLLEKHYRDM QDMEFTIEQG KLWMLQTRGG KRTAKAALRI
AVELANEGLI NRKDAVTRIE PGSLDQLLHP TIDPNAKRDV IATGLPASPG AASGEIVFSS
DEAAKLHADG RKVVLVRIET SPEDIHGMHA SEGILTTRGG MTSHAAVVAR GMGKPCVSGC
GAIRVDYGRG TMMIGNRTFK AGDIITIDGG TGQVLAGKMP MIEPELSGDF NTLMGWADEV
RKLKVRVNAD TPADARTAIK FGAEGIGLCR TEHMFFEETR IRTVREMILA EDEQSRRSAL
AKLLPMQRAD FVELFEIMKG LPVTVRLLDP PLHEFLPHTQ AEIEEVARAM NADPRRLADR
ARELAEFNPM LGFRGCRLAI AYPEIAEMQA RAIFEAAVEA EKRTGEQVGL EVMVPLIATR
AEFELVKARI DATAQAVNRD TGSNLKYQVG TMIELPRACL MAGDIAESAE FFSFGTNDLT
QTTFGISRDD AASFLGTYIE KGIFTVDPFV SVDRDGVGEL VRIGVERGRK TRAKLKVGIC
GEHGGDPASV AFCHEVGLDY VSCSPYRVPI ARLAAAQAAL GKGIASQA
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