Gene Rpal_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1197 
Symbol 
ID6408853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1267838 
End bp1268488 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID642711095 
ProductNUDIX hydrolase 
Protein accessionYP_001990212 
Protein GI192289607 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAGG TCGATTTTCC GACGACGAAG GGCGATAAGT TGCGAACTCC GGTGCTGGCA 
GCAGGCGGAA TCGTGTTGCG GCGCGGCAAA GATCCGCTGT TCGCGGTCGT CCGGATGCGC 
AAGCGCAACG ATTGGGTGCT GCCCAAGGGC AAGCTCGATC ATGGTGAGAC GCCACGCCAG 
GCCGCCGAGC GCGAGGTGCT GGAAGAGACC GGCCACGTCG TTGCGGTCCA CGAATTCATC 
GGCACGCTCG CCTATGACTC CGGCGGCCGT TCCAAGGTGG TGCATTTCTG GCGGATGGAG 
GCCGAGCCAC GGCAGACCCT GCCGCTGATG AAGGACATCC GCGCGGTCGA TTGGTTGCCG 
CTCGACGAGG CGCTGCAGCG GCTGTCGCGC AGCTACGAGC AGGCGTTTCT GACCGAGGTG 
GGCCCATTGG TGCTGGAATC GGCTGGCCAC TTCCTGTCGG CAGCCCCCGC CGCGCCGCCG 
CCACCGCGCT GCCCGACCAG TCCGTTGCCG ACCGGGGACG AGATCGTCAC CGACCTTGCC 
GAAGCTCCGT CGTTGGCGCT CGAACAACCA TCCGAAGCGC TCGAACCGCA GCCGCCGCTG 
TCGATGCTGC AACGACTGCG ACGATGGCTG CGGGGGCAGT CCCGCTCCTG A
 
Protein sequence
MVEVDFPTTK GDKLRTPVLA AGGIVLRRGK DPLFAVVRMR KRNDWVLPKG KLDHGETPRQ 
AAEREVLEET GHVVAVHEFI GTLAYDSGGR SKVVHFWRME AEPRQTLPLM KDIRAVDWLP 
LDEALQRLSR SYEQAFLTEV GPLVLESAGH FLSAAPAAPP PPRCPTSPLP TGDEIVTDLA 
EAPSLALEQP SEALEPQPPL SMLQRLRRWL RGQSRS