| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1188 |
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| Symbol | |
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| ID | 6408844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1260735 |
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| End bp | 1261604 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711086 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001990203 |
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| Protein GI | 192289598 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.971563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAC CACAAAGCCG CTTCTTTCAA TCCCACGGCC TGCGCCTGCA CTGTTGGGAC
TGGGGCAACG CCGCCGCGCC GCCGCTGCTG TTGATCCATG GCGGCAAGGA CCACGGCCGA
AGCTGGGATG TTTTCGCCCG CGCACTGCAG CCGCACTTTC ATGTGATCGC GCCGGATCTG
CGGGGCCATG GCGATTCGGA CTGGGCGCGC GGCGGCAGCT ACGCGCTGCC GGAGTACGTC
TACGACCTGA CCCGCCTGCC GCCGCTCGCT GATGCTCAGC CTGCCACCGT GATCGGCCAT
TCGATGGGCG GGATGATCGC GATGCTGTAT GCCGGGACAT TCCCGGAAAA GGTGAAACGG
CTCGTGGTGC TCGACGGCGT GACGGTCCGC CCCGACGCCA AGATGGCCCC GGTCCACGAG
CGGATGATCA AATGGCTCGG GCAGCTCGAC CGGCTGGAAG GCCGCGAGCC ACGCCACTAC
CCGACGATCG CCAATGCCGC AGCGCAGATG CGCGCCCACA ACAAACGGCT GACGCCGGAC
CTTGCGCTGC ACCTCGCCAC CCATGGGGCC CGCCGCAACG ACGACGGCAG CTATTCGTGG
AAGTTCGATC CGTATCAGCG TGTCACGGCA CCGCACCGGC TGGCGCCGCA GGAATACGCC
GAGCTGTGGG GGCGGATCAC CTGCCCGACG CTGCTGTTGT TTGCAGGCGA GAGCTTCATC
GATCCGGCTC GGGCCGCAGA AGCCTCACGA TATTTCGCGG ACGTTCGCGC CGAGATCGTC
GCCGATGCCG GCCACTGGCT GCAACACGAC CGGCCGGAAG AGGTGCTGCG GCTGATTTCG
GGATTCGTCG AGCTACCATC CAGGTCTTGA
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| Protein sequence | MQQPQSRFFQ SHGLRLHCWD WGNAAAPPLL LIHGGKDHGR SWDVFARALQ PHFHVIAPDL
RGHGDSDWAR GGSYALPEYV YDLTRLPPLA DAQPATVIGH SMGGMIAMLY AGTFPEKVKR
LVVLDGVTVR PDAKMAPVHE RMIKWLGQLD RLEGREPRHY PTIANAAAQM RAHNKRLTPD
LALHLATHGA RRNDDGSYSW KFDPYQRVTA PHRLAPQEYA ELWGRITCPT LLLFAGESFI
DPARAAEASR YFADVRAEIV ADAGHWLQHD RPEEVLRLIS GFVELPSRS
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