| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1167 |
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| Symbol | |
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| ID | 6408823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1234562 |
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| End bp | 1236835 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711065 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001990182 |
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| Protein GI | 192289577 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCGG CCGCGCCGCT CACCGCTGCC GCCGAACGCG CCCGGGTGCG CGTCCGCGGC
GCGGTGCAGG GCGTCGGGTT CCGGCCGTTC GTGTACCATC TGGCGCAGCG CTATCGGCTC
GGCGGCTTCG TGGCCAACGA TGCCGACGGC GTCCTGATCG AAGTCGAAGG GGCGGCGCTG
CCGGAGTTCC TGGTCGCGCT CCGCCGCGAG GCGCCGCCGC TGGCGCGGGT CGACACCATC
GAGACCGAAA CAGTTCGTGC GCGCGGCGAC AGGGACTTCG GGATCGCGGA GAGCCGCGGC
GGGGTGGTGA CCACGCGGAT CGGGGCGGAC GCGGCGACGT GCGAGGCCTG CCTCGACGAT
CTGTTCGATC CGGCGAGCCG GTTTTATCTC TACCCGTTCG TCAATTGCAC CCATTGCGGC
CCGCGCTACA CGCTGACACG CGGCCTGCCC TACGACCGCG CCAATACCTC GATGGCCGGC
TTTACGATGT GCGAGGATTG TCGTCGCGAC TATCAGGATC CGCACAACCG CCGCTTTCAC
GCCGAGCCGA TCGCCTGCCC GCGCTGCGGC CCGCAGCTCA GCCATCCGAT CGAGGAGATC
GTCGCTTGCT TGCGCGACGG CCGGATCGTC GCGCTGAAAA GCCTCGGCGG CTATCATCTG
CTGTGCGACG CCACCAGCGA AGCCGCCGTC GTCGAGCTGC GCCGGCGCAA AGGCCGCGAC
GCCAAGCCGT TCGCCGTGAT GGTTGCGTCC GAAGCTTCGC TGGATCGCAT CGTCATCGCG
ACCGAGGCCG AGCGCGCGTT GGTGTCGTCG GTCGAGCGGC CGATCGTGCT GATGCGCGAT
CGCGGTGCGC TGGCGCCGTC GGTTGCGCCC GCGCTCGATG CGGTCGGCGT GATGCTGCCC
TATACGCCGC TGCATCATCT GATCTTCCAT GCCGCCATGG GCGCGCCCGC GGGACGCGAG
TGGCAGCGCG CGCCGGTTGA TCTGGCACTG GTCGCCACCA GCGCCAATCT CGGCGGCGAT
CCGATCGTGA CCGAGGATGC GCAGCGGCGG CTGGCATCTG TCGCTGATCT GATCGTCAGC
CATGATCGAG ACATCGTGGT GCGCGCCGAC GACAGCGTCG CGCGGGTGAT CGACGGTGCA
CCGTCATTCA TCCGCCGCGC ACGCGGCTTC ACGCCGCGGC CGATCACATT GCCGGGCGAG
ACGCCGCCGG TGCTGGCGGT CGGCGCCTAC TTGAAAAACA CCATCACGCT GACCCGCGGC
GGCGAGGCGT TCGTGTCGCA GCATGTCGGC GATCTCGCCA CTGCCGAAAC CGTGCGATTC
TTTGAAGAGA CGGTGGACCA CCTGACGCGT CTCGTCGGCG TGAAGCCGGC CGCAATCGCG
CACGATCTGC ACGCCGACTT CGCCTCGACC CGTTTTGCCG AGAGCCTCGC CGCCGAGCAT
CTGGGCCTGC CGCTGATCGC CGTGCAGCAT CATCATGCCC ATGTCGCCTC GATCGCGGCC
GAGCACGGCA TCGACACGCC GCTGCTCGGC CTCGTATTCG ACGGTCACGG CCTCGGCAGC
GACGGCGGCA ATTGGGGCGG CGAACTGCTG CGCGTCGATG GCATGCGGTT CAGCCGGCTG
GGCCACCTGA AGCCATTGGC GCTACCCGGC GGCGATGCGG CGGCACGCGA GCCGTGGCGA
ATGGCGGCGG CGGCGCTTCA CGCGCTCGGG CGCGACGATG AGATCGCATC GCGCTTCGCC
GATCAGCCCC GCGCGGCAGC GCTCGCCGCG ATGCTCGCCA ATCACGGCTG CGCCACCACC
ACCAGCGCCG GCCGGCTGTT CGATGCGGTC GCGGGCCTGC TCGGCGTTTG CGCCGTACAA
AGCTATGAAG GCCAGGCGGC CATGCAGCTC GAAGCGCTGG TGCAAATCCC GCGCGTGCTG
GGCGGCGGCT GGGAGATCGG CGCCGGCACG CTCGATCTCT CGTCGCTGCT CGCCCATTTG
GCGACGTCGC GGATCGATGC GCGAGACGGC GCCGAACTGT TCCATGGCAC GCTCGCGGCC
GCGCTGGCTG CGTGGGCCGT GCATGCCGCG GAGCAGAGCG GACTTACTAC CATTGCACTC
GGCGGCGGCT GTTTCCTCAA CCGCGTACTG AGCGAAGATC TGGCGGCGCG GCTGCGCGCG
CGAGGGCTGA CGCCGTTGCT GGCGCGGCAG GTGCCGCCGA ACGATGGCGG CCTCAGCCTT
GGTCAGGCCT GGATCGCCGG ACAACATCTC ACTGCCAGCA AGGAGCCGCA CTGA
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| Protein sequence | MQPAAPLTAA AERARVRVRG AVQGVGFRPF VYHLAQRYRL GGFVANDADG VLIEVEGAAL
PEFLVALRRE APPLARVDTI ETETVRARGD RDFGIAESRG GVVTTRIGAD AATCEACLDD
LFDPASRFYL YPFVNCTHCG PRYTLTRGLP YDRANTSMAG FTMCEDCRRD YQDPHNRRFH
AEPIACPRCG PQLSHPIEEI VACLRDGRIV ALKSLGGYHL LCDATSEAAV VELRRRKGRD
AKPFAVMVAS EASLDRIVIA TEAERALVSS VERPIVLMRD RGALAPSVAP ALDAVGVMLP
YTPLHHLIFH AAMGAPAGRE WQRAPVDLAL VATSANLGGD PIVTEDAQRR LASVADLIVS
HDRDIVVRAD DSVARVIDGA PSFIRRARGF TPRPITLPGE TPPVLAVGAY LKNTITLTRG
GEAFVSQHVG DLATAETVRF FEETVDHLTR LVGVKPAAIA HDLHADFAST RFAESLAAEH
LGLPLIAVQH HHAHVASIAA EHGIDTPLLG LVFDGHGLGS DGGNWGGELL RVDGMRFSRL
GHLKPLALPG GDAAAREPWR MAAAALHALG RDDEIASRFA DQPRAAALAA MLANHGCATT
TSAGRLFDAV AGLLGVCAVQ SYEGQAAMQL EALVQIPRVL GGGWEIGAGT LDLSSLLAHL
ATSRIDARDG AELFHGTLAA ALAAWAVHAA EQSGLTTIAL GGGCFLNRVL SEDLAARLRA
RGLTPLLARQ VPPNDGGLSL GQAWIAGQHL TASKEPH
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