Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1126 |
Symbol | |
ID | 6408782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1198114 |
End bp | 1200150 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642711027 |
Product | hypothetical protein |
Protein accession | YP_001990144 |
Protein GI | 192289539 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
TIGRFAM ID | [TIGR02653] conserved hypothetical protein [TIGR02688] conserved hypothetical protein TIGR02688 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.596948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCG CCCCTGTACG CGACGCTCTC GACGACAAGG TCAACCGGAC CTTCGCTGGC AAAGTTGTTC GGAAAGACCT CGTCCGGAAG GTCAAGGTCG GTGCCAACGT GCCGGTCTTC GTCCTCGAGT TTCTGCTCGG AAAATACTGC GCGTCGTCGG ACGAGATGGC GATCCAGATG GGCCTGCAGG TGGTCAACGA CACGCTGGCG AACAACTACA TCCGCTCCGA CGAGTCGATG AAGGCGCAGA GCAAGGTCAA GGAAAAGGGT AGCTGGACCT TCATCGACAA GGTCAAGGTT CGCCTGGTCG ACTCCGATTA TTGGGCGGAG TTGAGCAACT TCGGGAACAA GTTCGTACAC ATCCAGAATC AGTACGTCAG GGACTATGAG CGTCTGCTGA CCGGGGGTGT CTGGGCCCAG GTGGACATGC GCTTTGAGTA CGACGAGGAG GGCAAGGGGA AAAACCCCTT TTGGATCGAG AAGCTCACGC CGATCCAGAT CGCGGCTTTC GACCTCGCCG AGTACCAGCG GCTTCGCGCG GAGTTCACGA CGGACGAGTG GATCAACCTC ATCCTGCGTA GCATGGGCTA CGAGCCCGGC GAGATGACGA AGCGCTTGAA GCTCCTCTTC CTGACGCGTC TGATCCCGTT GTGCGAGCGC AACTACAATC TGGTCGAACT GGGCCCGCGC GGTACCGGCA AAAGCTATGT CATCCAGGAA GTTTCTCCGT ACGCCGCCCT CATGACCGGC CCGACGACGG TCGCGAACCT GTTCGGGCAC ATGGGCGGAC GCGCGAAGGG CCTCGTTCAG ATCTGGGACG TCGTCGGCTT CGACGAAGTC GCGGATCTCG AGAAGATGCC CAAGGAGGTC ATCACCACGA TGAAGACCTA CTGCGAATCC GGGTCGTTCC AGCGTGGTCA GGAGGCCGCG TCCGGAGAAG CCGGTGTCGC CTTGTTCGGC AACACCCAGC AGCCGATCGA CGTCATGGTC CAAACCGGAC ACCTGTTCGA ACCGATGCCC GAGGTTATCC GGGACGACAT GGCGTTCATC GACCGCCTGC ACTTCTACCT GCCTGGCTGG GAAATCCCCA AGATGCGGAA CGACCTCTTC ACGGACCACT ACGGTTTCGT GGTGGATTTC CTGGCTGAGG CGCTGCGCGA ATTGCGGCGG CACAATTTCA CGGAGATCAG CGACCGGCAC TTCACGATGG GATCCCACCT GATCACCCGC GACCGAAAAG CGGTCAAGAA GACCGTGTCG GGGTTGATGA AGATCATTCA TCCGAGCGGC GAGGCCACCC AGGACGAGAT CGCCGAGCTC CTGGAGTTCG CCATGGAGGG CCGACGCCGG GTGAAGGAGC AGCTGAAGAA GATGGGCTCC TTTGAATACT ACCACACGTC CTTCAGCTAC ACCCTCAACG ACACCGGCGA AGAGCGGTTC GTGGGCGTGC CTGAGCAGGG CGGCCGCAAC ATGATCTCGG CCGATCCTCT CCCGCCGGGC AGCGTCTACA CGGCGGCCGT CGCGCAGGAC GGCACGGTCG GCATGTACCG CATCGAGGTT TCGGTCTCGT CGGGATCCGG AAAACTGAAG ACGGCCGGCG GCGTCAACGG CGTGACCAAG GAATCGATCA ATCGCGCGTT CAGTTACATG CTCGCAAAGA AGGGGGATCT TTCCATCGCC CGCGAACTCG ACGTCTCCGA CCTTCACGTC GAGGTCATCG ACCTCATGAA CAACCGCGTC GAAGGCGAGA TCGGGCTCGG CTTCTTCATC GCGGCGTTCT CCGCACTCAA AAAGGCTCCT CCATCTGCCG CCATGCTGGT AGTCGGCGAT CTTAGCGTTC AGGGTAACAT CAAGGGGCTG CGATCGCTGG CGGAACCGCT TCAACTCGCC ATGGACAATG GCGCCAAGCG AGCGCTGATC CCGATCGAGA ACAAACGCAG CTTCCTAGAA GTTACTGGGG ACGTGGTGGA GCACGTCGAT CCAATCTTCT ATGGAGATCC CAAAACGGCT GCGTTCAAGG CGCTGGGAAT AAACTGA
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Protein sequence | MSTAPVRDAL DDKVNRTFAG KVVRKDLVRK VKVGANVPVF VLEFLLGKYC ASSDEMAIQM GLQVVNDTLA NNYIRSDESM KAQSKVKEKG SWTFIDKVKV RLVDSDYWAE LSNFGNKFVH IQNQYVRDYE RLLTGGVWAQ VDMRFEYDEE GKGKNPFWIE KLTPIQIAAF DLAEYQRLRA EFTTDEWINL ILRSMGYEPG EMTKRLKLLF LTRLIPLCER NYNLVELGPR GTGKSYVIQE VSPYAALMTG PTTVANLFGH MGGRAKGLVQ IWDVVGFDEV ADLEKMPKEV ITTMKTYCES GSFQRGQEAA SGEAGVALFG NTQQPIDVMV QTGHLFEPMP EVIRDDMAFI DRLHFYLPGW EIPKMRNDLF TDHYGFVVDF LAEALRELRR HNFTEISDRH FTMGSHLITR DRKAVKKTVS GLMKIIHPSG EATQDEIAEL LEFAMEGRRR VKEQLKKMGS FEYYHTSFSY TLNDTGEERF VGVPEQGGRN MISADPLPPG SVYTAAVAQD GTVGMYRIEV SVSSGSGKLK TAGGVNGVTK ESINRAFSYM LAKKGDLSIA RELDVSDLHV EVIDLMNNRV EGEIGLGFFI AAFSALKKAP PSAAMLVVGD LSVQGNIKGL RSLAEPLQLA MDNGAKRALI PIENKRSFLE VTGDVVEHVD PIFYGDPKTA AFKALGIN
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