Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1077 |
Symbol | |
ID | 6408733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1142470 |
End bp | 1143300 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642710984 |
Product | hypothetical protein |
Protein accession | YP_001990101 |
Protein GI | 192289496 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACA CCCCGCGAAC GTCGACGGAA ACCCACCCTT CAAATCTCGA GCAAATGCGC TCGCCTTCCT ACGAGTTGGC AGCACTCGAT CAGGATTTCC TGCTTGGCGA TTCCATGCGT GGTGTGCGGT TCATGCTAGA ATTTGAGAAG GCAGAGGAGT TCCTGAGAGC GTGGGGAGTG CGATCGACTA TAGTGGTCTT TGGATCGGCA CGCGTTCGGG AAGATGGACC GCCCAGGCAT TTACGATGGT ACCGGGAGGC ACGCTCGTTC GCTCATCTAG CTTCCAAGCG CGGGGGTGCA CTCACCTCGA ATGGCGGCAT CCGCGACAAC GTTATAGCAA CTGGTGGAGG TCCGGGGATT ATGGAAGCCG CGAATCGAGG AGCAAACGAC GCGAGCGCGC CTTCCATTGG TTTCAACATC ACCCTGCCGC ATGAACAGCA ACCGAACCGT TACTCGACGC CCGAACTGAC GTTCCGATTC CACTACTTTG CCATGCGCAA GATGCACTTG GCCATGCGCG CCAACGCTCT CGTCGCGTTT CCCGGCGGCT TCGGCACGCT GGACGAGTTG TTCGAGATCT TGACCTTGAG GCAGACGAAG AAATCGCCGG CCATTCCGAT TGTGCTATTT GACGAACAGT ATTGGCGGTC TGTCGTCAAT TTCGAAGCGC TCATCGACAG TGGCACTATC GACAGATCCG ACTGCGATAT CTTTCGGTTC GCGGAAACTG CTGAAGGCGT TTGGTCGGAA CTAATTTCAT GCGGCCTGGG CGTACCCGGT CTTTCCTGTC AGGCCTCGAA ATTCGGTCGA GCCAAATCTT CGCACGCCTG A
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Protein sequence | MNDTPRTSTE THPSNLEQMR SPSYELAALD QDFLLGDSMR GVRFMLEFEK AEEFLRAWGV RSTIVVFGSA RVREDGPPRH LRWYREARSF AHLASKRGGA LTSNGGIRDN VIATGGGPGI MEAANRGAND ASAPSIGFNI TLPHEQQPNR YSTPELTFRF HYFAMRKMHL AMRANALVAF PGGFGTLDEL FEILTLRQTK KSPAIPIVLF DEQYWRSVVN FEALIDSGTI DRSDCDIFRF AETAEGVWSE LISCGLGVPG LSCQASKFGR AKSSHA
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