Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1030 |
Symbol | |
ID | 6408686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1096397 |
End bp | 1097671 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642710945 |
Product | integrase family protein |
Protein accession | YP_001990062 |
Protein GI | 192289457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAACG CGCTCTTTAC GCCCAAGCGT CACCGGGAAA GCGGCATCTT CCTGTTCCGG AAGCGCGTGC CAGAACGGCT GAAAGACGCC GTCGGCAAGA ACGAGATCAA GTTCTCGCTG CAGACACGCG ATCCCGTCGT CGCGCGGATC CGCAATCTCG AGGAGATGGC GCGGCTCGAG CGCGCATGGG CCGAGATCGA CGGCACGCGC CTCGAAAACT CCCAACGCTT CGCCTCCTAC CTGGACACCA AGTTCGCCCG GCGGCCCGCG GTCGCCGGCG AGCCGGCTCG GGTCGTCGCG GACGCCGCAG CAGGCGCGAC CGGCCCGTCG TCGGTCGACG GGCCGCCGAA GACGCCGGTG CCGCTGCGGC CGCTCTTCGC GTCCTACGCC AAGGAGGCCG AACTCGCGCC GTCGACGGTG AAGCGCTGGA CGCCGGTCCT CGACCGCCTG ATCGCCCATC TCGGCCACGA CGACGCGGCG GCGATCTCGC GGACCGACAT CGTGGCCTGG AAGGACGCGC TGCTCGACGG CGGCATGTCG AACGTCACCG TCCGCGACGT CTACGTGGCG GCGGCGAAGG CGACGCTGCA GTACGCGGTC GATCAGGGAA CGCTTCCGGA AAATCCCGCC GCCGGCATCA AGGTGCGCGT GCGCGAGGCG CTGCTGGAAC GCGACAAGGG CTTCGACGGC AAGGAGGCCG AGACGATCCT GTCCGCGACG CTCCGCACGC CGTCGGACAA GATCAGCGTC GAGATGGCGG CCGCGCGCCG GTGGGTGCCG TGGATCTGCG CCTATACCGG CGGCCGGGTC AACGAGATCA CGCCGCTCGC CTGGTGCGAC TTCGTCCGGC GCGACGGCAT CTGGATGATC CGGATCCGCG CCGAGACCAA CAAGACGCGC AAGTTTCGGG AGGTCCCGCT CCATAGCCAT CTGATCGAGC AGGGATTGCT CGACTACGCG AAATCGCGCG GCACGCGGCC GCTCTTCTAC GATCCGCGCC GCAGCCGCGG GGCCAAGGAT TCGAATCCGC ATCACAAGAA GGTCGGCGAG CGTCTGGCGG AGTGGGTCCG CTCGCTCGGC ATCGATCCGC GCGTGGCGCC GAATCACGGC TGGCGCCACC GCTTCTCCTC GATCTCCCGC GTCGTCGCGA TGCCCGAGGA CGTCCGCAAC ATCATCCAGG GTCACGCCGG CGCCAAGGTC GCCGACCGCT ACGGCGAGAC CTGGCCGCTG GTCGCGCTGC GCGAGATCGA GAAGCTGCCG CGGTATCTGG CCTGA
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Protein sequence | MVNALFTPKR HRESGIFLFR KRVPERLKDA VGKNEIKFSL QTRDPVVARI RNLEEMARLE RAWAEIDGTR LENSQRFASY LDTKFARRPA VAGEPARVVA DAAAGATGPS SVDGPPKTPV PLRPLFASYA KEAELAPSTV KRWTPVLDRL IAHLGHDDAA AISRTDIVAW KDALLDGGMS NVTVRDVYVA AAKATLQYAV DQGTLPENPA AGIKVRVREA LLERDKGFDG KEAETILSAT LRTPSDKISV EMAAARRWVP WICAYTGGRV NEITPLAWCD FVRRDGIWMI RIRAETNKTR KFREVPLHSH LIEQGLLDYA KSRGTRPLFY DPRRSRGAKD SNPHHKKVGE RLAEWVRSLG IDPRVAPNHG WRHRFSSISR VVAMPEDVRN IIQGHAGAKV ADRYGETWPL VALREIEKLP RYLA
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