| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1009 |
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| Symbol | |
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| ID | 6408664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1072338 |
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| End bp | 1072997 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642710923 |
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| Product | thiamine monophosphate synthase |
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| Protein accession | YP_001990041 |
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| Protein GI | 192289436 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA AGCCTGCTCC ATCGCGTCCG GCGCCGCGCC TGTATCTGGC GACGCCGGTG
ACTGCCGATC CCGCCGCCGT GGCCGCGGCC CTGCCGAAGC TGCTCGCCGC TGCCGATATC
GCGGCGGTGC TGCTGCGGCT GGAATCGTCC GATCCGCGGA CCCTGACGTC GCGGATCAAG
GCGGTGGCAC CGGTGGTGCA GGCAGGCGGC GCGGCGCTCC TGGTCGACGG CCACGCCGAC
CTGGTGGCCC GCGGCGGCGC CGACGGGGCG CATCTGTCAG GCATCAAGGC GATGCAGGAA
TGGCTGCCGC AGTTGCAGCC GTCCCGGATC GCCGGCGTCG GCGGGCTGGA AACCCGCCAT
GATTCGATGA TCGCCGGCGA AGCTGGCGCC GATTACGTGC TATTCGGCGA ACCCGGCGCC
GATGGAACCC GGCCGTCGCC GGAGGCGATC GCCGAGCGGC TGGACTGGTG GGCCGAGCTG
TTCGAGCCGC CGTGCGTCGG CTATGCGACC AGCCGCGAGG AAGTCCATCA ATTCGCCACA
GCAGGTGCCG ATTTCGTGCT GGTGGGCGAC TTCATCTGGG GCGCCGACGA TCCCACGGCC
GCGCTGGCGG ACGCCGGCGA AGCGCTACGT CAAGGCTTCG CTGCCGCCCC CCGGCAATGA
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| Protein sequence | MNAKPAPSRP APRLYLATPV TADPAAVAAA LPKLLAAADI AAVLLRLESS DPRTLTSRIK
AVAPVVQAGG AALLVDGHAD LVARGGADGA HLSGIKAMQE WLPQLQPSRI AGVGGLETRH
DSMIAGEAGA DYVLFGEPGA DGTRPSPEAI AERLDWWAEL FEPPCVGYAT SREEVHQFAT
AGADFVLVGD FIWGADDPTA ALADAGEALR QGFAAAPRQ
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