Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0950 |
Symbol | |
ID | 6408604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1011007 |
End bp | 1011858 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710864 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001989983 |
Protein GI | 192289378 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.616045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG CGTCGATGAA TAAACCCGCA GATATTCGCG CGGAGCCGAT GGCGGTGCGG GTGCGGCGGC GGGCGCGGCT GGTGCTCGTG CTGCGGCTCG CGGTGCTGAT CGCATTGATC GCCGGCTGGG AGTTCGGCGT GCGGTTCGGC GTGATCGATC CGTTCTTCTT CGGCCAACCC AGCGGCATCG TGCTGAAGCT GATCGACTGG ATTCAGAACG ACACCTCGAT CGGCCCGCTG TGGCGGCAGG TGTGGGTAAC GATCTACGAG GCCGGCGCCG GTTTCCTGAT CGGCGCCGTG CTCGGCGTAC TGTGCGGCAT CGCGCTCGGC CGCAATCACC TGCTGTCGGA CGTGTTCTCG ATCTACATCA AGGTCGCCAA CTCGATCCCG CGCGTCGTGC TCGGCTCGAT CTTCATCGTC GCGCTCGGTC TCGGCGCGGC GTCGAAGATC GCGCTCGCGG TGGTGATGGT GTTCTTCGTA GTGTTCGCCA ATGCGTTCCA GGGCGTTCGC GAGGCCGACA AGAACCTGAT CGCCAATGCG CGGATTCTCG GCGCCAGTCC GTGGCAGGTG ACGACCTCGG TGGTGATCCC CTCGGCGCTG TCGTGGATTC TGGCGAGCCT GCATGTCAGC TTCGGCTTCG CGCTCGTCGG CGCCATCGTC GGCGAATTCC TCGGCGCCCG CGAGGGCATG GGCCTGCTGA TCGCCACCGC GCAGGGCTCG TTCGACAGCA ACGGCGTGTT CGCCGCGATG ATCGTCATCG CCGTGGTGGC GCTGGTCGCC GAAGGGCTGC TGACCGCGCT GGAGAAGCGG CTGCTGACGT GGCGGCCGGA GGCCTCGGCT CTCAACGATT AG
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Protein sequence | MTDASMNKPA DIRAEPMAVR VRRRARLVLV LRLAVLIALI AGWEFGVRFG VIDPFFFGQP SGIVLKLIDW IQNDTSIGPL WRQVWVTIYE AGAGFLIGAV LGVLCGIALG RNHLLSDVFS IYIKVANSIP RVVLGSIFIV ALGLGAASKI ALAVVMVFFV VFANAFQGVR EADKNLIANA RILGASPWQV TTSVVIPSAL SWILASLHVS FGFALVGAIV GEFLGAREGM GLLIATAQGS FDSNGVFAAM IVIAVVALVA EGLLTALEKR LLTWRPEASA LND
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