Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0736 |
Symbol | |
ID | 6408389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 771851 |
End bp | 773470 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710651 |
Product | benzoate-CoA ligase family |
Protein accession | YP_001989771 |
Protein GI | 192289166 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTAC GCGACTACAA CGCGGCGGTC GATTTCGTCG ACCGCAACGT GGCGGAAGGC CGGGGCAGCA AAATCGCCTT CATCGACCCG CAGCGCAGTT TGAGTTATGG CGAGCTCCGC GACGCCGTCG CGCGCGTTGG GCCGATGCTG GCACGGCTCG GCATCGAGCA GGAAAACCGC ATCGCGCTGG TCCTGAAGGA CACCGTCGAC TTCCCGATCC TGTTCTGGGG TGCCATCCGG GCCGGCATCG TTCCGGTGCT TCTCAACACC CGGCTGACCG CCGATCAGTA TCGCTATCTG CTCGAGGATT CACGATCCAG GGTGGTGTTC GCCTCATCGG AATTCCTGCC GGTGATCGAA GAGGCCGCGG CCGACCTACC GCACCTGCGT ACGATGATCG CTGTCGGCGG CGCTCCGCCA CCGACTTTGC AACTGGCCGA TCTGCTCGCT GCCGAGCAGG AGGGCGGCGC GCCGGCAGCG ACCTGCTCCG ACGACATCGC CTATTGGCAA TATTCCTCCG GCACCACGGG GATGCCGAAG GGCGTGATGC ACGTGCATTC AAGCCCGCGG GTGATGGCGG AGAACGCCGG ACGCCGGATC GGCTACCGCG AAGACGACGT GGTGTTCTCG GCGGCCAAGC TGTTTTTCGC TTACGGGCTT GGCAACGCGA TGTTCTGCAC CATGGGGATC GGCGCCACCT CGGTGCTTTA TCCTGAGCGA CCGACCGCCG ACTCGGTATT CGATACGTTA CGGTTCCACC AACCGACGCT GCTGTTCGCA GTGCCGACGC TGTATGCCGC GATGCTCGCC GATCCGCGCT CTCGCACCGA GACACTTCCG GATCGGCTCC GGCTGTGCAT ATCCGCTGGC GAACCCCTGC CGGCGCAGGT CGGCCTCAAC TGGCGCAATC GTTTCGGGCA CGACATCGTC AACGGCGTCG GCTCGACCGA GATGGGCCAT TTGTTCCTGA CCAATCTGCC GCACGCGGTC GAATACGGCA CGTCGGGCGT GCCGGTTGAC GGCTATCGGC TGCGGCTGGT CGACGACCGC GGCCAGGACG TCACCGACGA CGAGATCGGC GAATTGCTGG TGAGCGGCGG CTCGTCGGCC GCGGGCTATT GGAATCAGCG CGACAAGACA CGAACGACCT TCGTCGGCGA ATGGACCCGG ACCGGCGACA AATATCACCG GCGCGCCGAC GGCGTTTACA CCTATTGCGG GCGGACCGAC GACATCTTCA AGGTCAGCGG CATCTGGGTG TCACCATTCG AGATCGAACA GGCGCTGATG AGTCACGCCA AGGTGCTGGA GGCTGCGGTG ATCCCGGCCG AGGACACCGA TGGGCTGGTC AAGCCGAAGG CGTTCATCGT ACTGGCGTCG CGCGGCGATA TCGATCCCGG CGCGCTGTTC GACGAACTGA AGGAGCACGT CAAGTGCGCG ATCGGGCCAT GGAAATATCC GCGCTGGATT CAGATCATGG ACGACCTGCC GAAGACATCG AGCGGCAAGC TTCAGCGCTA TCTTCTGCGC GAGATGACGC TCGACGGGAT TGAAGCCACG GAAAGCGCGC CCTCTGAGCC CGCACTCTAC GGACGCGTCG TCGCCGGCAA CGGACGATGA
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Protein sequence | MPLRDYNAAV DFVDRNVAEG RGSKIAFIDP QRSLSYGELR DAVARVGPML ARLGIEQENR IALVLKDTVD FPILFWGAIR AGIVPVLLNT RLTADQYRYL LEDSRSRVVF ASSEFLPVIE EAAADLPHLR TMIAVGGAPP PTLQLADLLA AEQEGGAPAA TCSDDIAYWQ YSSGTTGMPK GVMHVHSSPR VMAENAGRRI GYREDDVVFS AAKLFFAYGL GNAMFCTMGI GATSVLYPER PTADSVFDTL RFHQPTLLFA VPTLYAAMLA DPRSRTETLP DRLRLCISAG EPLPAQVGLN WRNRFGHDIV NGVGSTEMGH LFLTNLPHAV EYGTSGVPVD GYRLRLVDDR GQDVTDDEIG ELLVSGGSSA AGYWNQRDKT RTTFVGEWTR TGDKYHRRAD GVYTYCGRTD DIFKVSGIWV SPFEIEQALM SHAKVLEAAV IPAEDTDGLV KPKAFIVLAS RGDIDPGALF DELKEHVKCA IGPWKYPRWI QIMDDLPKTS SGKLQRYLLR EMTLDGIEAT ESAPSEPALY GRVVAGNGR
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